Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACF2JY_RS18375 Genome accession   NZ_CP172966
Coordinates   3528201..3529151 (-) Length   316 a.a.
NCBI ID   WP_038428356.1    Uniprot ID   A0AA96ZV99
Organism   Bacillus subtilis strain cel     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3523201..3534151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF2JY_RS18355 (ACF2JY_18355) cdaE 3524069..3525487 (+) 1419 WP_014478836.1 MDR family MFS transporter -
  ACF2JY_RS18360 (ACF2JY_18360) yclQ 3525534..3526487 (-) 954 WP_038428358.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ACF2JY_RS18365 (ACF2JY_18365) yclP 3526509..3527267 (-) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACF2JY_RS18370 (ACF2JY_18370) yclO 3527261..3528208 (-) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  ACF2JY_RS18375 (ACF2JY_18375) ceuB 3528201..3529151 (-) 951 WP_038428356.1 petrobactin ABC transporter permease YclN Machinery gene
  ACF2JY_RS18380 (ACF2JY_18380) thrD 3529536..3530900 (+) 1365 WP_038428355.1 aspartate kinase -
  ACF2JY_RS18385 (ACF2JY_18385) yczN 3531054..3531167 (+) 114 WP_003234495.1 YjcZ family sporulation protein -
  ACF2JY_RS18390 (ACF2JY_18390) yczM 3531249..3531338 (+) 90 WP_015482794.1 YjcZ family sporulation protein -
  ACF2JY_RS18395 (ACF2JY_18395) phrC 3531438..3531560 (-) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ACF2JY_RS18400 (ACF2JY_18400) rapC 3531544..3532692 (-) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=1069741 ACF2JY_RS18375 WP_038428356.1 3528201..3529151(-) (ceuB) [Bacillus subtilis strain cel]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYLYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1069741 ACF2JY_RS18375 WP_038428356.1 3528201..3529151(-) (ceuB) [Bacillus subtilis strain cel]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTGATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATTTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment