Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ACF2JY_RS08240 | Genome accession | NZ_CP172966 |
| Coordinates | 1555611..1555946 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain cel | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1550611..1560946
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF2JY_RS08190 (ACF2JY_08190) | comGC | 1550629..1550925 (+) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| ACF2JY_RS08195 (ACF2JY_08195) | comGD | 1550915..1551346 (+) | 432 | WP_046381179.1 | comG operon protein ComGD | Machinery gene |
| ACF2JY_RS08200 (ACF2JY_08200) | comGE | 1551330..1551677 (+) | 348 | WP_046381178.1 | ComG operon protein 5 | Machinery gene |
| ACF2JY_RS08205 (ACF2JY_08205) | comGF | 1551703..1552086 (+) | 384 | WP_046160582.1 | ComG operon protein ComGF | Machinery gene |
| ACF2JY_RS08210 (ACF2JY_08210) | comGG | 1552087..1552461 (+) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACF2JY_RS08215 (ACF2JY_08215) | spoIITA | 1552533..1552712 (+) | 180 | WP_029726723.1 | YqzE family protein | - |
| ACF2JY_RS08220 (ACF2JY_08220) | yqzG | 1552754..1553080 (-) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ACF2JY_RS08225 (ACF2JY_08225) | tapA | 1553352..1554113 (+) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACF2JY_RS08230 (ACF2JY_08230) | sipW | 1554097..1554669 (+) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| ACF2JY_RS08235 (ACF2JY_08235) | tasA | 1554733..1555518 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| ACF2JY_RS08240 (ACF2JY_08240) | sinR | 1555611..1555946 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ACF2JY_RS08245 (ACF2JY_08245) | sinI | 1555980..1556153 (-) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ACF2JY_RS08250 (ACF2JY_08250) | yqhG | 1556336..1557130 (-) | 795 | WP_003230200.1 | YqhG family protein | - |
| ACF2JY_RS08255 (ACF2JY_08255) | hepAA | 1557151..1558824 (-) | 1674 | WP_003230203.1 | DEAD/DEAH box helicase | - |
| ACF2JY_RS08260 (ACF2JY_08260) | gcvT | 1559266..1560354 (+) | 1089 | WP_003230205.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=1069706 ACF2JY_RS08240 WP_003226345.1 1555611..1555946(-) (sinR) [Bacillus subtilis strain cel]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=1069706 ACF2JY_RS08240 WP_003226345.1 1555611..1555946(-) (sinR) [Bacillus subtilis strain cel]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |