Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACFELJ_RS24785 | Genome accession | NZ_CP172859 |
| Coordinates | 5295224..5295781 (+) | Length | 185 a.a. |
| NCBI ID | WP_003125211.1 | Uniprot ID | A0A6A9K9C7 |
| Organism | Pseudomonas aeruginosa strain 238629E_ID006 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5290224..5300781
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFELJ_RS24765 (ACFELJ_24765) | pilR | 5291500..5292837 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| ACFELJ_RS24770 (ACFELJ_24770) | thiO | 5292883..5293977 (-) | 1095 | WP_110194839.1 | glycine oxidase ThiO | - |
| ACFELJ_RS24775 (ACFELJ_24775) | - | 5294112..5294621 (+) | 510 | WP_110194330.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACFELJ_RS24780 (ACFELJ_24780) | - | 5294727..5295233 (+) | 507 | WP_003134935.1 | Tfp pilus assembly protein FimT/FimU | - |
| ACFELJ_RS24785 (ACFELJ_24785) | pilV | 5295224..5295781 (+) | 558 | WP_003125211.1 | type 4a pilus minor pilin PilV | Machinery gene |
| ACFELJ_RS24790 (ACFELJ_24790) | pilW | 5295778..5296602 (+) | 825 | WP_400637234.1 | type 4a pilus minor pilin PilW | - |
| ACFELJ_RS24795 (ACFELJ_24795) | pilX | 5296599..5297186 (+) | 588 | WP_033972921.1 | type 4a pilus minor pilin PilX | - |
| ACFELJ_RS24800 (ACFELJ_24800) | pilY1 | 5297198..5300683 (+) | 3486 | WP_400637236.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20087.19 Da Isoelectric Point: 8.2171
>NTDB_id=1069530 ACFELJ_RS24785 WP_003125211.1 5295224..5295781(+) (pilV) [Pseudomonas aeruginosa strain 238629E_ID006]
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHRSLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1069530 ACFELJ_RS24785 WP_003125211.1 5295224..5295781(+) (pilV) [Pseudomonas aeruginosa strain 238629E_ID006]
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGACACAGGTCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGTACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGATACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
98.919 |
100 |
0.989 |