Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ER16_RS02580 | Genome accession | NZ_CP007659 |
| Coordinates | 550747..553203 (+) | Length | 818 a.a. |
| NCBI ID | WP_000897132.1 | Uniprot ID | Q99W78 |
| Organism | Staphylococcus aureus strain H-EMRSA-15 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 545747..558203
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ER16_RS02555 (ER16_02450) | pdxT | 546550..547110 (+) | 561 | WP_000690441.1 | pyridoxal 5'-phosphate synthase glutaminase subunit PdxT | - |
| ER16_RS02560 (ER16_02455) | - | 547318..548532 (-) | 1215 | WP_000547794.1 | NupC/NupG family nucleoside CNT transporter | - |
| ER16_RS02565 (ER16_02460) | - | 548690..549151 (+) | 462 | WP_000551762.1 | CtsR family transcriptional regulator | - |
| ER16_RS02570 (ER16_02465) | - | 549170..549736 (+) | 567 | WP_000882069.1 | UvrB/UvrC motif-containing protein | - |
| ER16_RS02575 (ER16_02470) | - | 549726..550733 (+) | 1008 | WP_001805606.1 | protein arginine kinase | - |
| ER16_RS02580 (ER16_02475) | clpC | 550747..553203 (+) | 2457 | WP_000897132.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ER16_RS02590 (ER16_02480) | radA/sms | 553688..555052 (+) | 1365 | WP_001085218.1 | DNA repair protein RadA | Machinery gene |
| ER16_RS02595 (ER16_02485) | - | 555077..556150 (+) | 1074 | WP_001028376.1 | PIN/TRAM domain-containing protein | - |
| ER16_RS02600 (ER16_02490) | gltX | 556707..558161 (+) | 1455 | WP_001283794.1 | glutamate--tRNA ligase | - |
Sequence
Protein
Download Length: 818 a.a. Molecular weight: 91037.33 Da Isoelectric Point: 5.4686
>NTDB_id=106925 ER16_RS02580 WP_000897132.1 550747..553203(+) (clpC) [Staphylococcus aureus strain H-EMRSA-15]
MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLHY
TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNT
PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVM
SLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASS
KVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTSLSEEDIAEVI
AGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLT
DTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELK
EIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHDGKE
FKYDIAEQTSETKTPSQA
MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDHVGTLHY
TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGNPEMSNKNAQASKSNNT
PTLDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVM
SLDMGTVVAGTKYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY
RKNIEKDAALERRFQPVQVDEPSVVDTVAILKGLRDRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASS
KVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEEAKNEWKNAQNGMSTSLSEEDIAEVI
AGWTGIPLTKINETESEKLLSLEDTLHERVIGQKDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLT
DTKGRTVDFRNTIIIMTSNVGAQELQDQRFAGFGGSSDGQDYETIRKTMLKELKNSFRPEFLNRVDDIIVFHKLTKEELK
EIVTMMVNKLTNRLSEQNINIIVTDKAKDKIAEEGYDPEYGARPLIRAIQKTIEDNLSELILDGNQIEGKKVTVDHDGKE
FKYDIAEQTSETKTPSQA
Nucleotide
Download Length: 2457 bp
>NTDB_id=106925 ER16_RS02580 WP_000897132.1 550747..553203(+) (clpC) [Staphylococcus aureus strain H-EMRSA-15]
ATGTTATTTGGTAGATTAACTGAGCGTGCACAGCGCGTATTAGCACATGCACAAGAAGAAGCAATTCGTTTAAATCATTC
AAATATAGGAACAGAACACCTATTATTGGGATTAATGAAAGAACCTGAAGGAATTGCTGCAAAAGTATTAGAAAGTTTTA
ATATCACTGAAGATAAAGTAATTGAAGAAGTTGAAAAATTAATCGGACATGGTCAAGATCATGTTGGTACATTGCATTAT
ACACCTAGAGCTAAAAAAGTCATTGAATTATCGATGGATGAAGCTAGAAAATTACATCACAATTTTGTTGGAACGGAACA
TATTTTATTAGGCTTGATTCGTGAAAATGAAGGTGTTGCAGCAAGAGTTTTTGCAAATCTAGATTTAAATATTACTAAAG
CACGTGCACAAGTTGTGAAAGCTTTAGGAAACCCTGAAATGAGTAATAAAAATGCACAAGCTAGTAAGTCAAATAATACT
CCAACTTTAGATAGTTTAGCTCGTGACTTAACAGTCATTGCCAAAGACGGTACATTAGATCCTGTTATAGGACGTGATAA
AGAAATTACACGTGTAATTGAAGTATTAAGTAGACGTACGAAAAACAATCCTGTGCTTATTGGAGAGCCAGGTGTTGGTA
AAACTGCTATTGCTGAAGGTTTAGCGCAAGCCATAGTGAATAATGAGGTACCAGAGACATTAAAAGATAAACGTGTTATG
TCTTTAGATATGGGAACAGTAGTTGCAGGTACTAAATATCGTGGTGAATTTGAAGAGCGTCTGAAAAAGGTTATGGAAGA
AATCCAACAAGCAGGTAATGTCATCCTATTTATTGATGAGTTGCATACTTTAGTTGGTGCTGGTGGTGCTGAAGGTGCTA
TCGATGCTTCGAATATTTTGAAGCCGGCATTAGCACGTGGTGAATTACAATGTATTGGTGCTACTACATTAGATGAATAT
CGCAAAAATATTGAAAAAGACGCGGCTTTAGAACGTCGTTTCCAACCTGTACAAGTTGATGAACCTTCAGTAGTAGATAC
AGTTGCTATTTTAAAAGGATTAAGAGATCGTTACGAAGCACACCATCGTATTAATATTTCAGACGAAGCTATTGAAGCAG
CTGTTAAATTAAGTAACAGATACGTTTCAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCAAGTTCT
AAAGTAAGACTTAAGAGTCATACGACACCTAATAATTTAAAAGAAATTGAACAAGAAATTGAAAAAGTTAAAAATGAAAA
AGATGCCGCAGTACATGCTCAAGAGTTTGAAAATGCTGCTAACCTGCGTGATAAACAAACAAAACTTGAAAAGCAATATG
AAGAAGCTAAAAATGAATGGAAGAATGCACAAAATGGCATGTCAACTTCATTGTCAGAAGAAGATATTGCTGAAGTTATT
GCAGGATGGACAGGTATCCCATTAACTAAAATCAATGAAACAGAATCTGAAAAACTTCTTAGTCTAGAAGATACATTACA
TGAGAGAGTTATTGGGCAAAAAGATGCTGTTAATTCAATCAGTAAAGCGGTTAGACGTGCCCGTGCAGGGTTAAAAGATC
CTAAACGACCAATTGGTAGCTTTATCTTCCTTGGACCAACTGGTGTTGGTAAAACTGAATTAGCTAGAGCTTTAGCTGAA
TCAATGTTTGGCGATGATGATGCGATGATCCGTGTAGACATGAGTGAATTTATGGAAAAACACGCAGTGAGCCGATTAGT
TGGTGCTCCTCCAGGATATGTTGGTCATGATGATGGTGGACAATTAACTGAAAAAGTTAGACGTAAACCGTATTCTGTAA
TTTTATTTGATGAAATTGAAAAAGCACATCCAGATGTATTTAATATTCTATTACAAGTTTTAGATGACGGACATTTGACA
GATACAAAAGGACGTACAGTTGATTTCAGAAATACAATTATCATAATGACATCAAACGTTGGAGCACAAGAATTACAAGA
TCAACGATTTGCTGGATTCGGTGGTTCAAGTGATGGACAAGATTATGAAACAATTCGAAAAACGATGTTAAAAGAATTAA
AAAATTCATTCCGTCCAGAATTTTTAAACCGTGTAGATGATATCATTGTATTCCATAAACTAACAAAAGAAGAATTAAAA
GAAATTGTAACAATGATGGTTAATAAATTAACAAATCGATTATCTGAACAAAACATAAATATTATTGTTACTGATAAAGC
GAAAGACAAAATCGCAGAAGAAGGATATGATCCAGAATATGGTGCAAGACCATTAATTAGAGCGATACAAAAAACTATCG
AAGATAATTTAAGTGAATTAATATTAGATGGTAATCAAATTGAAGGTAAGAAAGTTACAGTAGATCATGATGGTAAAGAG
TTTAAATATGACATTGCTGAACAAACTTCAGAAACTAAAACACCATCGCAAGCATAA
ATGTTATTTGGTAGATTAACTGAGCGTGCACAGCGCGTATTAGCACATGCACAAGAAGAAGCAATTCGTTTAAATCATTC
AAATATAGGAACAGAACACCTATTATTGGGATTAATGAAAGAACCTGAAGGAATTGCTGCAAAAGTATTAGAAAGTTTTA
ATATCACTGAAGATAAAGTAATTGAAGAAGTTGAAAAATTAATCGGACATGGTCAAGATCATGTTGGTACATTGCATTAT
ACACCTAGAGCTAAAAAAGTCATTGAATTATCGATGGATGAAGCTAGAAAATTACATCACAATTTTGTTGGAACGGAACA
TATTTTATTAGGCTTGATTCGTGAAAATGAAGGTGTTGCAGCAAGAGTTTTTGCAAATCTAGATTTAAATATTACTAAAG
CACGTGCACAAGTTGTGAAAGCTTTAGGAAACCCTGAAATGAGTAATAAAAATGCACAAGCTAGTAAGTCAAATAATACT
CCAACTTTAGATAGTTTAGCTCGTGACTTAACAGTCATTGCCAAAGACGGTACATTAGATCCTGTTATAGGACGTGATAA
AGAAATTACACGTGTAATTGAAGTATTAAGTAGACGTACGAAAAACAATCCTGTGCTTATTGGAGAGCCAGGTGTTGGTA
AAACTGCTATTGCTGAAGGTTTAGCGCAAGCCATAGTGAATAATGAGGTACCAGAGACATTAAAAGATAAACGTGTTATG
TCTTTAGATATGGGAACAGTAGTTGCAGGTACTAAATATCGTGGTGAATTTGAAGAGCGTCTGAAAAAGGTTATGGAAGA
AATCCAACAAGCAGGTAATGTCATCCTATTTATTGATGAGTTGCATACTTTAGTTGGTGCTGGTGGTGCTGAAGGTGCTA
TCGATGCTTCGAATATTTTGAAGCCGGCATTAGCACGTGGTGAATTACAATGTATTGGTGCTACTACATTAGATGAATAT
CGCAAAAATATTGAAAAAGACGCGGCTTTAGAACGTCGTTTCCAACCTGTACAAGTTGATGAACCTTCAGTAGTAGATAC
AGTTGCTATTTTAAAAGGATTAAGAGATCGTTACGAAGCACACCATCGTATTAATATTTCAGACGAAGCTATTGAAGCAG
CTGTTAAATTAAGTAACAGATACGTTTCAGATCGTTTCTTACCAGATAAAGCAATTGATTTAATTGATGAAGCAAGTTCT
AAAGTAAGACTTAAGAGTCATACGACACCTAATAATTTAAAAGAAATTGAACAAGAAATTGAAAAAGTTAAAAATGAAAA
AGATGCCGCAGTACATGCTCAAGAGTTTGAAAATGCTGCTAACCTGCGTGATAAACAAACAAAACTTGAAAAGCAATATG
AAGAAGCTAAAAATGAATGGAAGAATGCACAAAATGGCATGTCAACTTCATTGTCAGAAGAAGATATTGCTGAAGTTATT
GCAGGATGGACAGGTATCCCATTAACTAAAATCAATGAAACAGAATCTGAAAAACTTCTTAGTCTAGAAGATACATTACA
TGAGAGAGTTATTGGGCAAAAAGATGCTGTTAATTCAATCAGTAAAGCGGTTAGACGTGCCCGTGCAGGGTTAAAAGATC
CTAAACGACCAATTGGTAGCTTTATCTTCCTTGGACCAACTGGTGTTGGTAAAACTGAATTAGCTAGAGCTTTAGCTGAA
TCAATGTTTGGCGATGATGATGCGATGATCCGTGTAGACATGAGTGAATTTATGGAAAAACACGCAGTGAGCCGATTAGT
TGGTGCTCCTCCAGGATATGTTGGTCATGATGATGGTGGACAATTAACTGAAAAAGTTAGACGTAAACCGTATTCTGTAA
TTTTATTTGATGAAATTGAAAAAGCACATCCAGATGTATTTAATATTCTATTACAAGTTTTAGATGACGGACATTTGACA
GATACAAAAGGACGTACAGTTGATTTCAGAAATACAATTATCATAATGACATCAAACGTTGGAGCACAAGAATTACAAGA
TCAACGATTTGCTGGATTCGGTGGTTCAAGTGATGGACAAGATTATGAAACAATTCGAAAAACGATGTTAAAAGAATTAA
AAAATTCATTCCGTCCAGAATTTTTAAACCGTGTAGATGATATCATTGTATTCCATAAACTAACAAAAGAAGAATTAAAA
GAAATTGTAACAATGATGGTTAATAAATTAACAAATCGATTATCTGAACAAAACATAAATATTATTGTTACTGATAAAGC
GAAAGACAAAATCGCAGAAGAAGGATATGATCCAGAATATGGTGCAAGACCATTAATTAGAGCGATACAAAAAACTATCG
AAGATAATTTAAGTGAATTAATATTAGATGGTAATCAAATTGAAGGTAAGAAAGTTACAGTAGATCATGATGGTAAAGAG
TTTAAATATGACATTGCTGAACAAACTTCAGAAACTAAAACACCATCGCAAGCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
70.412 |
97.922 |
0.689 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.407 |
99.756 |
0.483 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.896 |
98.289 |
0.451 |
| clpC | Streptococcus pneumoniae Rx1 |
45.896 |
98.289 |
0.451 |
| clpC | Streptococcus pneumoniae D39 |
45.896 |
98.289 |
0.451 |
| clpC | Streptococcus thermophilus LMD-9 |
44.498 |
100 |
0.45 |
| clpC | Streptococcus mutans UA159 |
44.217 |
100 |
0.449 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.377 |
100 |
0.449 |
| clpE | Streptococcus mutans UA159 |
54.63 |
79.218 |
0.433 |
| clpE | Streptococcus pneumoniae TIGR4 |
54.984 |
76.039 |
0.418 |
| clpE | Streptococcus pneumoniae Rx1 |
54.823 |
76.039 |
0.417 |
| clpE | Streptococcus pneumoniae D39 |
54.823 |
76.039 |
0.417 |
| clpE | Streptococcus pneumoniae R6 |
54.823 |
76.039 |
0.417 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
52.147 |
79.707 |
0.416 |