Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACF1RT_RS10320 Genome accession   NZ_CP172847
Coordinates   2072576..2073346 (+) Length   256 a.a.
NCBI ID   WP_032506325.1    Uniprot ID   -
Organism   Streptococcus mutans strain DPC6143     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2067576..2078346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF1RT_RS10305 (ACF1RT_10305) - 2069200..2069862 (-) 663 WP_002262652.1 YoaK family protein -
  ACF1RT_RS10310 (ACF1RT_10310) rlmH 2070205..2070684 (-) 480 WP_002262651.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACF1RT_RS10315 (ACF1RT_10315) htrA 2070890..2072098 (+) 1209 WP_002262650.1 S1C family serine protease Regulator
  ACF1RT_RS10320 (ACF1RT_10320) spo0J 2072576..2073346 (+) 771 WP_032506325.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 256 a.a.        Molecular weight: 29477.19 Da        Isoelectric Point: 10.1578

>NTDB_id=1069123 ACF1RT_RS10320 WP_032506325.1 2072576..2073346(+) (spo0J) [Streptococcus mutans strain DPC6143]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSVEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLV

Nucleotide


Download         Length: 771 bp        

>NTDB_id=1069123 ACF1RT_RS10320 WP_032506325.1 2072576..2073346(+) (spo0J) [Streptococcus mutans strain DPC6143]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGATTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTACACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTGTAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.216

99.609

0.988


Multiple sequence alignment