Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   ACFVP7_RS17505 Genome accession   NZ_CP172606
Coordinates   3305775..3305915 (-) Length   46 a.a.
NCBI ID   WP_003220708.1    Uniprot ID   G4P060
Organism   Bacillus sp. SG20033     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3300775..3310915
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS17480 (ACFVP7_17480) - 3301051..3301431 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ACFVP7_RS17485 (ACFVP7_17485) comA 3301450..3302094 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACFVP7_RS17490 (ACFVP7_17490) comP 3302175..3304487 (-) 2313 WP_396582572.1 histidine kinase Regulator
  ACFVP7_RS17495 (ACFVP7_17495) comX 3304503..3304724 (-) 222 WP_014114983.1 competence pheromone ComX -
  ACFVP7_RS17500 (ACFVP7_17500) - 3304721..3305590 (-) 870 WP_169037713.1 polyprenyl synthetase family protein -
  ACFVP7_RS17505 (ACFVP7_17505) degQ 3305775..3305915 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACFVP7_RS17510 (ACFVP7_17510) - 3306137..3306262 (+) 126 WP_338730755.1 hypothetical protein -
  ACFVP7_RS17515 (ACFVP7_17515) - 3306377..3306745 (+) 369 WP_017695529.1 hypothetical protein -
  ACFVP7_RS17520 (ACFVP7_17520) pdeH 3306721..3307950 (-) 1230 WP_338730756.1 cyclic di-GMP phosphodiesterase -
  ACFVP7_RS17525 (ACFVP7_17525) - 3308087..3309559 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ACFVP7_RS17530 (ACFVP7_17530) - 3309575..3310126 (-) 552 WP_014477836.1 cysteine hydrolase family protein -
  ACFVP7_RS17535 (ACFVP7_17535) - 3310223..3310621 (-) 399 WP_338730758.1 YueI family protein -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5546.44 Da        Isoelectric Point: 6.2559

>NTDB_id=1068327 ACFVP7_RS17505 WP_003220708.1 3305775..3305915(-) (degQ) [Bacillus sp. SG20033]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1068327 ACFVP7_RS17505 WP_003220708.1 3305775..3305915(-) (degQ) [Bacillus sp. SG20033]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4P060

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment