Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   ACFVP7_RS17485 Genome accession   NZ_CP172606
Coordinates   3301450..3302094 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus sp. SG20033     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3296450..3307094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFVP7_RS17450 (ACFVP7_17450) - 3297642..3298073 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  ACFVP7_RS17455 (ACFVP7_17455) - 3298073..3298414 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  ACFVP7_RS17460 (ACFVP7_17460) - 3298407..3299888 (+) 1482 WP_338730754.1 Na+/H+ antiporter subunit D -
  ACFVP7_RS17465 (ACFVP7_17465) - 3299894..3300370 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ACFVP7_RS17470 (ACFVP7_17470) - 3300370..3300654 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACFVP7_RS17475 (ACFVP7_17475) mnhG 3300638..3301012 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  ACFVP7_RS17480 (ACFVP7_17480) - 3301051..3301431 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  ACFVP7_RS17485 (ACFVP7_17485) comA 3301450..3302094 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACFVP7_RS17490 (ACFVP7_17490) comP 3302175..3304487 (-) 2313 WP_396582572.1 histidine kinase Regulator
  ACFVP7_RS17495 (ACFVP7_17495) comX 3304503..3304724 (-) 222 WP_014114983.1 competence pheromone ComX -
  ACFVP7_RS17500 (ACFVP7_17500) - 3304721..3305590 (-) 870 WP_169037713.1 polyprenyl synthetase family protein -
  ACFVP7_RS17505 (ACFVP7_17505) degQ 3305775..3305915 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACFVP7_RS17510 (ACFVP7_17510) - 3306137..3306262 (+) 126 WP_338730755.1 hypothetical protein -
  ACFVP7_RS17515 (ACFVP7_17515) - 3306377..3306745 (+) 369 WP_017695529.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=1068325 ACFVP7_RS17485 WP_003220716.1 3301450..3302094(-) (comA) [Bacillus sp. SG20033]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1068325 ACFVP7_RS17485 WP_003220716.1 3301450..3302094(-) (comA) [Bacillus sp. SG20033]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATTTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment