Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ACFMPA_RS12515 | Genome accession | NZ_CP172605 |
| Coordinates | 2449350..2450387 (-) | Length | 345 a.a. |
| NCBI ID | WP_033884704.1 | Uniprot ID | - |
| Organism | Bacillus sp. SG20032 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2444350..2455387
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFMPA_RS12465 (ACFMPA_12465) | tasA | 2444447..2445232 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| ACFMPA_RS12470 (ACFMPA_12470) | sipW | 2445296..2445868 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ACFMPA_RS12475 (ACFMPA_12475) | tapA | 2445852..2446613 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACFMPA_RS12480 (ACFMPA_12480) | - | 2446885..2447211 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ACFMPA_RS12485 (ACFMPA_12485) | - | 2447253..2447432 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| ACFMPA_RS12490 (ACFMPA_12490) | comGG | 2447504..2447878 (-) | 375 | WP_033884701.1 | ComG operon protein ComGG | Machinery gene |
| ACFMPA_RS12495 (ACFMPA_12495) | comGF | 2447879..2448262 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| ACFMPA_RS12500 (ACFMPA_12500) | comGE | 2448288..2448635 (-) | 348 | WP_033884703.1 | ComG operon protein 5 | Machinery gene |
| ACFMPA_RS12505 (ACFMPA_12505) | comGD | 2448619..2449050 (-) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| ACFMPA_RS12510 (ACFMPA_12510) | comGC | 2449040..2449336 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| ACFMPA_RS12515 (ACFMPA_12515) | comGB | 2449350..2450387 (-) | 1038 | WP_033884704.1 | comG operon protein ComGB | Machinery gene |
| ACFMPA_RS12520 (ACFMPA_12520) | comGA | 2450374..2451444 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| ACFMPA_RS12525 (ACFMPA_12525) | - | 2451672..2451854 (-) | 183 | WP_033884706.1 | hypothetical protein | - |
| ACFMPA_RS12530 (ACFMPA_12530) | corA | 2451856..2452809 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| ACFMPA_RS12535 (ACFMPA_12535) | - | 2452952..2454280 (+) | 1329 | WP_033884708.1 | hemolysin family protein | - |
| ACFMPA_RS12540 (ACFMPA_12540) | rsbRD | 2454333..2455169 (-) | 837 | WP_033884709.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39748.19 Da Isoelectric Point: 9.6257
>NTDB_id=1068231 ACFMPA_RS12515 WP_033884704.1 2449350..2450387(-) (comGB) [Bacillus sp. SG20032]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLEGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLEGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1068231 ACFMPA_RS12515 WP_033884704.1 2449350..2450387(-) (comGB) [Bacillus sp. SG20032]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGAAGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCCCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGAAGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCCCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |