Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ACFMPA_RS06135 Genome accession   NZ_CP172605
Coordinates   1185168..1185359 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. SG20032     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1180168..1190359
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFMPA_RS06105 (ACFMPA_06105) argF 1181033..1181992 (+) 960 WP_029317606.1 ornithine carbamoyltransferase -
  ACFMPA_RS06110 (ACFMPA_06110) - 1182078..1182257 (+) 180 WP_003245356.1 YjzC family protein -
  ACFMPA_RS06115 (ACFMPA_06115) - 1182303..1182488 (-) 186 WP_029317607.1 YjzD family protein -
  ACFMPA_RS06120 (ACFMPA_06120) - 1182737..1183471 (+) 735 WP_014479433.1 hypothetical protein -
  ACFMPA_RS06125 (ACFMPA_06125) - 1183553..1184110 (+) 558 WP_029317608.1 hypothetical protein -
  ACFMPA_RS06130 (ACFMPA_06130) med 1184200..1185153 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ACFMPA_RS06135 (ACFMPA_06135) comZ 1185168..1185359 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ACFMPA_RS06140 (ACFMPA_06140) yjzB 1185389..1185619 (-) 231 WP_080265337.1 spore coat protein YjzB -
  ACFMPA_RS06145 (ACFMPA_06145) fabH 1185784..1186722 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ACFMPA_RS06150 (ACFMPA_06150) fabF 1186745..1187986 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ACFMPA_RS06155 (ACFMPA_06155) - 1188062..1188847 (+) 786 WP_069322523.1 DUF2268 domain-containing protein -
  ACFMPA_RS06160 (ACFMPA_06160) appD 1189039..1190025 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1068206 ACFMPA_RS06135 WP_003224559.1 1185168..1185359(+) (comZ) [Bacillus sp. SG20032]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1068206 ACFMPA_RS06135 WP_003224559.1 1185168..1185359(+) (comZ) [Bacillus sp. SG20032]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment