Detailed information NTG1068205

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACFMPA_RS06130
• Genome accession: NZ_CP172605
• Coordinates: 1184200..1185153 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus sp. SG20032
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1179200..1190153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFMPA_RS06105 (ACFMPA_06105)	argF	1181033..1181992 (+)	960	WP_029317606.1	ornithine carbamoyltransferase	-
ACFMPA_RS06110 (ACFMPA_06110)	-	1182078..1182257 (+)	180	WP_003245356.1	YjzC family protein	-
ACFMPA_RS06115 (ACFMPA_06115)	-	1182303..1182488 (-)	186	WP_029317607.1	YjzD family protein	-
ACFMPA_RS06120 (ACFMPA_06120)	-	1182737..1183471 (+)	735	WP_014479433.1	hypothetical protein	-
ACFMPA_RS06125 (ACFMPA_06125)	-	1183553..1184110 (+)	558	WP_029317608.1	hypothetical protein	-
ACFMPA_RS06130 (ACFMPA_06130)	med	1184200..1185153 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
ACFMPA_RS06135 (ACFMPA_06135)	comZ	1185168..1185359 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ACFMPA_RS06140 (ACFMPA_06140)	yjzB	1185389..1185619 (-)	231	WP_080265337.1	spore coat protein YjzB	-
ACFMPA_RS06145 (ACFMPA_06145)	fabH	1185784..1186722 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ACFMPA_RS06150 (ACFMPA_06150)	fabF	1186745..1187986 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ACFMPA_RS06155 (ACFMPA_06155)	-	1188062..1188847 (+)	786	WP_069322523.1	DUF2268 domain-containing protein	-
ACFMPA_RS06160 (ACFMPA_06160)	appD	1189039..1190025 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=1068205 ACFMPA_RS06130 WP_014476425.1 1184200..1185153(+) (med) [Bacillus sp. SG20032]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=1068205 ACFMPA_RS06130 WP_014476425.1 1184200..1185153(+) (med) [Bacillus sp. SG20032]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997