Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACFMPA_RS02285 Genome accession   NZ_CP172605
Coordinates   437385..438335 (+) Length   316 a.a.
NCBI ID   WP_088325307.1    Uniprot ID   -
Organism   Bacillus sp. SG20032     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 432385..443335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFMPA_RS02260 (ACFMPA_02260) rapC 433845..434993 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  ACFMPA_RS02265 (ACFMPA_02265) phrC 434977..435099 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ACFMPA_RS02270 (ACFMPA_02270) - 435199..435288 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  ACFMPA_RS02275 (ACFMPA_02275) - 435370..435483 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  ACFMPA_RS02280 (ACFMPA_02280) - 435636..437000 (-) 1365 WP_326224553.1 aspartate kinase -
  ACFMPA_RS02285 (ACFMPA_02285) ceuB 437385..438335 (+) 951 WP_088325307.1 petrobactin ABC transporter permease YclN Machinery gene
  ACFMPA_RS02290 (ACFMPA_02290) yclO 438328..439275 (+) 948 WP_326224555.1 petrobactin ABC transporter permease YclO -
  ACFMPA_RS02295 (ACFMPA_02295) yclP 439269..440027 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  ACFMPA_RS02300 (ACFMPA_02300) yclQ 440049..441002 (+) 954 WP_151261998.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ACFMPA_RS02305 (ACFMPA_02305) - 441049..442467 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=1068195 ACFMPA_RS02285 WP_088325307.1 437385..438335(+) (ceuB) [Bacillus sp. SG20032]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1068195 ACFMPA_RS02285 WP_088325307.1 437385..438335(+) (ceuB) [Bacillus sp. SG20032]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTAGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTTGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment