Detailed information NTG1068034

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACG2XO_RS06435
• Genome accession: NZ_CP172558
• Coordinates: 1343785..1344942 (-)
• Length: 385 a.a.
• NCBI ID: WP_410499989.1
• Uniprot ID: -
• Organism: Chitinibacter sp. S2-10
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1338785..1349942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG2XO_RS06410 (ACG2XO_06410)	-	1340033..1340866 (+)	834	WP_410499984.1	threonine/serine exporter family protein	-
ACG2XO_RS06415 (ACG2XO_06415)	-	1340878..1341336 (+)	459	WP_410499985.1	threonine/serine exporter family protein	-
ACG2XO_RS06420 (ACG2XO_06420)	-	1341389..1342147 (+)	759	WP_410499986.1	hypothetical protein	-
ACG2XO_RS06425 (ACG2XO_06425)	ftsX	1342149..1343051 (-)	903	WP_410499987.1	permease-like cell division protein FtsX	-
ACG2XO_RS06430 (ACG2XO_06430)	ftsE	1343062..1343715 (-)	654	WP_410499988.1	cell division ATP-binding protein FtsE	-
ACG2XO_RS06435 (ACG2XO_06435)	pilA	1343785..1344942 (-)	1158	WP_410499989.1	signal recognition particle-docking protein FtsY	Machinery gene
ACG2XO_RS06440 (ACG2XO_06440)	rsmD	1345170..1345751 (+)	582	WP_410499990.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACG2XO_RS06445 (ACG2XO_06445)	-	1345838..1346089 (+)	252	WP_410499991.1	YfhL family 4Fe-4S dicluster ferredoxin	-
ACG2XO_RS06450 (ACG2XO_06450)	-	1346256..1347800 (+)	1545	WP_410499992.1	diguanylate cyclase	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 41328.92 Da
• Isoelectric Point: 4.8355

>NTDB_id=1068034 ACG2XO_RS06435 WP_410499989.1 1343785..1344942(-) (pilA) [Chitinibacter sp. S2-10]
MFSFFRKKKSDDVTTEQDLSTIPPEAGSANSAPTSEAAPQDDIAQSEHTGVFPATPDSTRPAEQYIEVDPAKLGNTDQPQ
ERPTLSWTERLKLGLAKTRDKLGKSLASVFGGGQIDEDLYEELETVLLTADMGVDATQHLLKDVRERVTLKGLKDPAELK
GALKDSLVELIEPLQIPLNVDGQKPFILMVAGVNGAGKTTSIGKLAKYFQSQGKSVLLAAGDTFRAAAREQLVVWGERNG
VHVIAQESGDAAAVAFDAVNSARARGIDVVIVDTAGRLPTQLHLMEEIKKVKRVVQKADPTGPHEIMLVLDANTGQNALA
QTKSFDDALGLTGLVLTKLDGTAKGGVIAAIAKNRPVPLRFIGVGETIDDLRPFDARDYIDALFE

Nucleotide

• Length: 1158 bp

>NTDB_id=1068034 ACG2XO_RS06435 WP_410499989.1 1343785..1344942(-) (pilA) [Chitinibacter sp. S2-10]
ATGTTCAGTTTTTTTCGCAAAAAGAAATCCGATGACGTCACCACGGAGCAGGATTTAAGCACTATCCCGCCAGAAGCAGG
ATCAGCAAACAGCGCGCCAACGTCCGAAGCAGCTCCGCAAGACGACATCGCCCAGTCAGAGCACACCGGGGTATTTCCAG
CTACGCCAGATTCAACAAGGCCTGCAGAGCAATACATCGAGGTCGACCCGGCCAAACTCGGCAATACCGACCAGCCACAG
GAACGCCCGACCTTAAGCTGGACCGAGCGCTTGAAACTGGGTCTGGCCAAGACGCGTGACAAACTCGGCAAAAGTCTCGC
CAGCGTGTTTGGCGGCGGCCAGATCGACGAAGACCTCTATGAAGAACTCGAAACGGTGTTGCTCACCGCCGATATGGGCG
TCGATGCGACGCAGCATTTACTCAAAGACGTGCGCGAACGCGTGACGCTCAAAGGGCTGAAAGACCCAGCCGAGCTCAAA
GGCGCGCTGAAAGACAGCCTGGTCGAGCTGATCGAGCCGCTGCAAATCCCGCTCAATGTTGACGGACAGAAACCTTTTAT
CCTGATGGTCGCCGGTGTCAATGGTGCGGGTAAAACCACGTCGATCGGTAAATTGGCGAAATATTTCCAGAGCCAGGGCA
AGAGCGTTTTGCTCGCCGCCGGCGATACCTTCCGCGCCGCAGCGCGCGAGCAACTGGTCGTCTGGGGCGAGCGCAATGGC
GTTCATGTGATTGCACAGGAATCGGGCGATGCGGCGGCGGTCGCATTTGACGCGGTCAATTCGGCGCGCGCGCGCGGCAT
TGACGTGGTGATTGTCGACACCGCTGGCCGCTTGCCAACGCAACTGCATCTGATGGAAGAAATCAAGAAAGTAAAACGCG
TGGTGCAAAAAGCCGATCCGACTGGCCCGCACGAAATCATGCTGGTGCTTGACGCCAACACCGGCCAGAACGCCTTGGCG
CAAACCAAATCGTTTGACGACGCGCTGGGACTGACTGGTCTGGTGCTAACCAAGCTCGACGGCACGGCCAAAGGCGGCGT
GATCGCAGCGATTGCCAAAAATCGCCCGGTGCCGCTGCGCTTTATCGGCGTTGGCGAAACCATTGACGATCTGCGGCCGT
TTGACGCACGAGACTACATCGACGCACTGTTTGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (186-384)

• SRP54-type protein, helical bundle domain (SRP54_N) (101-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	72.222	79.481	0.574