Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACIA35_RS06705 | Genome accession | NZ_CP172554 |
| Coordinates | 1283953..1284528 (+) | Length | 191 a.a. |
| NCBI ID | WP_011543464.1 | Uniprot ID | A0AAV5PJF2 |
| Organism | Lactobacillus delbrueckii subsp. bulgaricus strain 771 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1278953..1289528
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIA35_RS06690 (ACIA35_06690) | gyrB | 1278958..1280919 (+) | 1962 | WP_011677861.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| ACIA35_RS06695 (ACIA35_06695) | gyrA | 1280932..1283403 (+) | 2472 | WP_396598245.1 | DNA gyrase subunit A | - |
| ACIA35_RS06700 (ACIA35_06700) | rpsF | 1283619..1283912 (+) | 294 | WP_003612647.1 | 30S ribosomal protein S6 | - |
| ACIA35_RS06705 (ACIA35_06705) | ssb | 1283953..1284528 (+) | 576 | WP_011543464.1 | single-stranded DNA-binding protein | Machinery gene |
| ACIA35_RS06710 (ACIA35_06710) | rpsR | 1284555..1284791 (+) | 237 | WP_396592184.1 | 30S ribosomal protein S18 | - |
| ACIA35_RS06715 (ACIA35_06715) | - | 1284932..1286953 (+) | 2022 | WP_011677864.1 | DHH family phosphoesterase | - |
| ACIA35_RS06720 (ACIA35_06720) | rplI | 1286977..1287432 (+) | 456 | WP_014564436.1 | 50S ribosomal protein L9 | - |
| ACIA35_RS06725 (ACIA35_06725) | dnaB | 1287456..1288826 (+) | 1371 | WP_003622122.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 20582.25 Da Isoelectric Point: 4.6437
>NTDB_id=1068013 ACIA35_RS06705 WP_011543464.1 1283953..1284528(+) (ssb) [Lactobacillus delbrueckii subsp. bulgaricus strain 771]
MINNVVLVGRLTRDPELRTTGSGISVATFTLAVDRQFTNASGQREADFISCVIWRKAAENFCNFTSKGSLVGIQGRIQTR
NYDNKDGQRVYVTEVLVDNFSLLESRRERESRQQNSGFGGQGQSQNTGFNTGFGGGSGYANNAFGSPAQSNGPANAGFNE
DNKKDAGGDTNTNPFDSSDDAINVSNDDLPF
MINNVVLVGRLTRDPELRTTGSGISVATFTLAVDRQFTNASGQREADFISCVIWRKAAENFCNFTSKGSLVGIQGRIQTR
NYDNKDGQRVYVTEVLVDNFSLLESRRERESRQQNSGFGGQGQSQNTGFNTGFGGGSGYANNAFGSPAQSNGPANAGFNE
DNKKDAGGDTNTNPFDSSDDAINVSNDDLPF
Nucleotide
Download Length: 576 bp
>NTDB_id=1068013 ACIA35_RS06705 WP_011543464.1 1283953..1284528(+) (ssb) [Lactobacillus delbrueckii subsp. bulgaricus strain 771]
ATGATCAATAACGTTGTACTTGTTGGCCGTTTAACACGTGATCCTGAATTACGTACTACTGGGAGCGGCATCTCGGTTGC
TACGTTCACTTTGGCCGTTGACCGGCAGTTTACCAATGCATCAGGCCAGAGAGAAGCGGACTTCATCAGCTGCGTGATTT
GGCGCAAGGCTGCGGAGAACTTCTGCAACTTCACCAGCAAGGGCAGTTTGGTGGGCATCCAGGGCCGGATCCAGACCAGA
AACTATGATAACAAGGACGGCCAGCGAGTTTACGTGACAGAAGTCCTCGTGGACAACTTCTCACTGCTCGAATCACGCCG
CGAGCGTGAAAGCCGTCAGCAAAACAGCGGATTTGGCGGCCAAGGTCAAAGCCAAAACACCGGCTTCAACACCGGATTTG
GCGGCGGCAGCGGCTACGCCAACAACGCCTTCGGCAGCCCGGCCCAGTCAAACGGGCCAGCTAATGCCGGATTCAATGAA
GATAACAAGAAAGATGCCGGCGGAGACACGAACACCAACCCGTTCGACAGCTCTGACGATGCAATCAACGTCTCAAATGA
CGATCTTCCATTTTAA
ATGATCAATAACGTTGTACTTGTTGGCCGTTTAACACGTGATCCTGAATTACGTACTACTGGGAGCGGCATCTCGGTTGC
TACGTTCACTTTGGCCGTTGACCGGCAGTTTACCAATGCATCAGGCCAGAGAGAAGCGGACTTCATCAGCTGCGTGATTT
GGCGCAAGGCTGCGGAGAACTTCTGCAACTTCACCAGCAAGGGCAGTTTGGTGGGCATCCAGGGCCGGATCCAGACCAGA
AACTATGATAACAAGGACGGCCAGCGAGTTTACGTGACAGAAGTCCTCGTGGACAACTTCTCACTGCTCGAATCACGCCG
CGAGCGTGAAAGCCGTCAGCAAAACAGCGGATTTGGCGGCCAAGGTCAAAGCCAAAACACCGGCTTCAACACCGGATTTG
GCGGCGGCAGCGGCTACGCCAACAACGCCTTCGGCAGCCCGGCCCAGTCAAACGGGCCAGCTAATGCCGGATTCAATGAA
GATAACAAGAAAGATGCCGGCGGAGACACGAACACCAACCCGTTCGACAGCTCTGACGATGCAATCAACGTCTCAAATGA
CGATCTTCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.333 |
100 |
0.586 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
46.597 |
100 |
0.466 |