Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACIA37_RS06470 | Genome accession | NZ_CP172549 |
| Coordinates | 1244890..1245465 (+) | Length | 191 a.a. |
| NCBI ID | WP_011543464.1 | Uniprot ID | A0AAV5PJF2 |
| Organism | Lactobacillus delbrueckii subsp. bulgaricus strain 1271 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1239890..1250465
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIA37_RS06455 (ACIA37_06455) | gyrB | 1239895..1241856 (+) | 1962 | WP_011677861.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| ACIA37_RS06460 (ACIA37_06460) | gyrA | 1241869..1244340 (+) | 2472 | WP_011677862.1 | DNA gyrase subunit A | - |
| ACIA37_RS06465 (ACIA37_06465) | rpsF | 1244556..1244849 (+) | 294 | WP_003612647.1 | 30S ribosomal protein S6 | - |
| ACIA37_RS06470 (ACIA37_06470) | ssb | 1244890..1245465 (+) | 576 | WP_011543464.1 | single-stranded DNA-binding protein | Machinery gene |
| ACIA37_RS06475 (ACIA37_06475) | rpsR | 1245492..1245728 (+) | 237 | WP_396592184.1 | 30S ribosomal protein S18 | - |
| ACIA37_RS06480 (ACIA37_06480) | - | 1245869..1247890 (+) | 2022 | WP_011677864.1 | DHH family phosphoesterase | - |
| ACIA37_RS06485 (ACIA37_06485) | rplI | 1247914..1248369 (+) | 456 | WP_014564436.1 | 50S ribosomal protein L9 | - |
| ACIA37_RS06490 (ACIA37_06490) | dnaB | 1248393..1249763 (+) | 1371 | WP_003622122.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 20582.25 Da Isoelectric Point: 4.6437
>NTDB_id=1067996 ACIA37_RS06470 WP_011543464.1 1244890..1245465(+) (ssb) [Lactobacillus delbrueckii subsp. bulgaricus strain 1271]
MINNVVLVGRLTRDPELRTTGSGISVATFTLAVDRQFTNASGQREADFISCVIWRKAAENFCNFTSKGSLVGIQGRIQTR
NYDNKDGQRVYVTEVLVDNFSLLESRRERESRQQNSGFGGQGQSQNTGFNTGFGGGSGYANNAFGSPAQSNGPANAGFNE
DNKKDAGGDTNTNPFDSSDDAINVSNDDLPF
MINNVVLVGRLTRDPELRTTGSGISVATFTLAVDRQFTNASGQREADFISCVIWRKAAENFCNFTSKGSLVGIQGRIQTR
NYDNKDGQRVYVTEVLVDNFSLLESRRERESRQQNSGFGGQGQSQNTGFNTGFGGGSGYANNAFGSPAQSNGPANAGFNE
DNKKDAGGDTNTNPFDSSDDAINVSNDDLPF
Nucleotide
Download Length: 576 bp
>NTDB_id=1067996 ACIA37_RS06470 WP_011543464.1 1244890..1245465(+) (ssb) [Lactobacillus delbrueckii subsp. bulgaricus strain 1271]
ATGATCAATAACGTTGTACTTGTTGGCCGTTTAACACGTGATCCTGAATTACGTACTACTGGGAGCGGCATCTCGGTTGC
TACGTTCACTTTGGCCGTTGACCGGCAGTTTACCAATGCATCAGGCCAGAGAGAAGCGGACTTCATCAGCTGCGTGATTT
GGCGCAAGGCTGCGGAGAACTTCTGCAACTTCACCAGCAAGGGCAGTTTGGTGGGCATCCAGGGCCGGATCCAGACCAGA
AACTATGATAACAAGGACGGCCAGCGAGTTTACGTGACAGAAGTCCTCGTGGACAACTTCTCACTGCTCGAATCACGCCG
CGAGCGTGAAAGCCGTCAGCAAAACAGCGGATTTGGCGGCCAAGGTCAAAGCCAAAACACCGGCTTCAACACCGGATTTG
GCGGCGGCAGCGGCTACGCCAACAACGCCTTCGGCAGCCCGGCCCAGTCAAACGGGCCAGCTAATGCCGGATTCAATGAA
GATAACAAGAAAGATGCCGGCGGAGACACGAACACCAACCCGTTCGACAGCTCTGACGATGCAATCAACGTCTCAAATGA
CGATCTTCCATTTTAA
ATGATCAATAACGTTGTACTTGTTGGCCGTTTAACACGTGATCCTGAATTACGTACTACTGGGAGCGGCATCTCGGTTGC
TACGTTCACTTTGGCCGTTGACCGGCAGTTTACCAATGCATCAGGCCAGAGAGAAGCGGACTTCATCAGCTGCGTGATTT
GGCGCAAGGCTGCGGAGAACTTCTGCAACTTCACCAGCAAGGGCAGTTTGGTGGGCATCCAGGGCCGGATCCAGACCAGA
AACTATGATAACAAGGACGGCCAGCGAGTTTACGTGACAGAAGTCCTCGTGGACAACTTCTCACTGCTCGAATCACGCCG
CGAGCGTGAAAGCCGTCAGCAAAACAGCGGATTTGGCGGCCAAGGTCAAAGCCAAAACACCGGCTTCAACACCGGATTTG
GCGGCGGCAGCGGCTACGCCAACAACGCCTTCGGCAGCCCGGCCCAGTCAAACGGGCCAGCTAATGCCGGATTCAATGAA
GATAACAAGAAAGATGCCGGCGGAGACACGAACACCAACCCGTTCGACAGCTCTGACGATGCAATCAACGTCTCAAATGA
CGATCTTCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.333 |
100 |
0.586 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
46.597 |
100 |
0.466 |