Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACIA4G_RS04550 | Genome accession | NZ_CP172540 |
| Coordinates | 852270..852845 (+) | Length | 191 a.a. |
| NCBI ID | WP_011543464.1 | Uniprot ID | A0AAV5PJF2 |
| Organism | Lactobacillus delbrueckii subsp. bulgaricus strain 2363 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 847270..857845
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIA4G_RS04535 (ACIA4G_04535) | gyrB | 847275..849236 (+) | 1962 | WP_011677861.1 | DNA topoisomerase (ATP-hydrolyzing) subunit B | - |
| ACIA4G_RS04540 (ACIA4G_04540) | gyrA | 849249..851720 (+) | 2472 | WP_396583881.1 | DNA gyrase subunit A | - |
| ACIA4G_RS04545 (ACIA4G_04545) | rpsF | 851936..852229 (+) | 294 | WP_011677863.1 | 30S ribosomal protein S6 | - |
| ACIA4G_RS04550 (ACIA4G_04550) | ssb | 852270..852845 (+) | 576 | WP_011543464.1 | single-stranded DNA-binding protein | Machinery gene |
| ACIA4G_RS04555 (ACIA4G_04555) | rpsR | 852872..853108 (+) | 237 | WP_003622127.1 | 30S ribosomal protein S18 | - |
| ACIA4G_RS04560 (ACIA4G_04560) | - | 853249..855270 (+) | 2022 | WP_011677864.1 | DHH family phosphoesterase | - |
| ACIA4G_RS04565 (ACIA4G_04565) | rplI | 855293..855748 (+) | 456 | WP_014564436.1 | 50S ribosomal protein L9 | - |
| ACIA4G_RS04570 (ACIA4G_04570) | dnaB | 855772..857142 (+) | 1371 | WP_003622122.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 20582.25 Da Isoelectric Point: 4.6437
>NTDB_id=1067963 ACIA4G_RS04550 WP_011543464.1 852270..852845(+) (ssb) [Lactobacillus delbrueckii subsp. bulgaricus strain 2363]
MINNVVLVGRLTRDPELRTTGSGISVATFTLAVDRQFTNASGQREADFISCVIWRKAAENFCNFTSKGSLVGIQGRIQTR
NYDNKDGQRVYVTEVLVDNFSLLESRRERESRQQNSGFGGQGQSQNTGFNTGFGGGSGYANNAFGSPAQSNGPANAGFNE
DNKKDAGGDTNTNPFDSSDDAINVSNDDLPF
MINNVVLVGRLTRDPELRTTGSGISVATFTLAVDRQFTNASGQREADFISCVIWRKAAENFCNFTSKGSLVGIQGRIQTR
NYDNKDGQRVYVTEVLVDNFSLLESRRERESRQQNSGFGGQGQSQNTGFNTGFGGGSGYANNAFGSPAQSNGPANAGFNE
DNKKDAGGDTNTNPFDSSDDAINVSNDDLPF
Nucleotide
Download Length: 576 bp
>NTDB_id=1067963 ACIA4G_RS04550 WP_011543464.1 852270..852845(+) (ssb) [Lactobacillus delbrueckii subsp. bulgaricus strain 2363]
ATGATCAATAACGTTGTACTTGTTGGCCGTTTAACACGTGATCCTGAATTACGTACTACTGGGAGCGGCATCTCGGTTGC
TACGTTCACTTTGGCCGTTGACCGGCAGTTTACCAATGCATCAGGCCAGAGAGAAGCGGACTTCATCAGCTGCGTGATTT
GGCGCAAGGCTGCGGAGAACTTCTGCAACTTCACCAGCAAGGGCAGTTTGGTGGGCATCCAGGGCCGGATCCAGACCAGA
AACTATGATAACAAGGACGGCCAGCGAGTTTACGTGACAGAAGTCCTCGTGGACAACTTCTCACTGCTCGAATCACGCCG
CGAGCGTGAAAGCCGTCAGCAAAACAGCGGATTTGGCGGCCAAGGTCAAAGCCAAAACACCGGCTTCAACACCGGATTTG
GCGGCGGCAGCGGCTACGCCAACAACGCCTTCGGCAGCCCGGCCCAGTCAAACGGGCCAGCTAATGCCGGATTCAATGAA
GATAACAAGAAAGATGCCGGCGGAGACACGAACACCAACCCGTTCGACAGCTCTGACGATGCAATCAACGTCTCAAATGA
CGATCTTCCATTTTAA
ATGATCAATAACGTTGTACTTGTTGGCCGTTTAACACGTGATCCTGAATTACGTACTACTGGGAGCGGCATCTCGGTTGC
TACGTTCACTTTGGCCGTTGACCGGCAGTTTACCAATGCATCAGGCCAGAGAGAAGCGGACTTCATCAGCTGCGTGATTT
GGCGCAAGGCTGCGGAGAACTTCTGCAACTTCACCAGCAAGGGCAGTTTGGTGGGCATCCAGGGCCGGATCCAGACCAGA
AACTATGATAACAAGGACGGCCAGCGAGTTTACGTGACAGAAGTCCTCGTGGACAACTTCTCACTGCTCGAATCACGCCG
CGAGCGTGAAAGCCGTCAGCAAAACAGCGGATTTGGCGGCCAAGGTCAAAGCCAAAACACCGGCTTCAACACCGGATTTG
GCGGCGGCAGCGGCTACGCCAACAACGCCTTCGGCAGCCCGGCCCAGTCAAACGGGCCAGCTAATGCCGGATTCAATGAA
GATAACAAGAAAGATGCCGGCGGAGACACGAACACCAACCCGTTCGACAGCTCTGACGATGCAATCAACGTCTCAAATGA
CGATCTTCCATTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.333 |
100 |
0.586 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
46.597 |
100 |
0.466 |