Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACG1BZ_RS01240 Genome accession   NZ_CP172449
Coordinates   259049..259444 (+) Length   131 a.a.
NCBI ID   WP_020413651.1    Uniprot ID   -
Organism   Microbulbifer sp. CNSA002     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 254049..264444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG1BZ_RS01215 (ACG1BZ_01215) hemC 254683..255600 (-) 918 WP_413664070.1 hydroxymethylbilane synthase -
  ACG1BZ_RS01220 (ACG1BZ_01220) ruvX 255678..256100 (-) 423 WP_413664071.1 Holliday junction resolvase RuvX -
  ACG1BZ_RS01225 (ACG1BZ_01225) - 256121..256705 (-) 585 WP_282930307.1 YqgE/AlgH family protein -
  ACG1BZ_RS01230 (ACG1BZ_01230) - 256740..257648 (-) 909 WP_413664072.1 energy transducer TonB -
  ACG1BZ_RS01235 (ACG1BZ_01235) gshB 257742..258698 (-) 957 WP_413664073.1 glutathione synthase -
  ACG1BZ_RS01240 (ACG1BZ_01240) pilG 259049..259444 (+) 396 WP_020413651.1 twitching motility response regulator PilG Regulator
  ACG1BZ_RS01245 (ACG1BZ_01245) pilH 259680..260042 (+) 363 WP_108731421.1 twitching motility response regulator PilH -
  ACG1BZ_RS01250 (ACG1BZ_01250) - 260059..260598 (+) 540 WP_413664074.1 chemotaxis protein CheW -
  ACG1BZ_RS01255 (ACG1BZ_01255) - 260759..262900 (+) 2142 WP_413664075.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14332.55 Da        Isoelectric Point: 7.2147

>NTDB_id=1067887 ACG1BZ_RS01240 WP_020413651.1 259049..259444(+) (pilG) [Microbulbifer sp. CNSA002]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDVIFVDIMMPRLDGYQTCALIKNNSEFR
STPVVMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=1067887 ACG1BZ_RS01240 WP_020413651.1 259049..259444(+) (pilG) [Microbulbifer sp. CNSA002]
ATGGAGCTTAACTGGGAAAGTCTGACTGTCATGGTGATCGACGACAGTAAGACAATTCGCCGCACTGCGGAGACGTTGCT
GCAAAAGGCGGGCTGTACCGTGGTCACCGCGACAGACGGTTTTGATGCGTTAGCAAAAATCGCGGACTCCCGTCCGGATG
TCATTTTTGTCGATATTATGATGCCGCGCCTGGATGGCTATCAAACATGTGCGTTAATAAAAAATAACAGCGAATTCCGC
TCCACCCCTGTTGTAATGTTGTCGAGTAAGGACGGTTTGTTCGATAAGGCAAAAGGGCGTGTTGTTGGTTGCGATCAATA
TCTGACCAAACCTTTTAGTAAGAGCGAGCTGCTGGGTGCTATTTCCGCTCATGCCAAGCCGCACCATGCCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

94.656

0.695
  vicR Streptococcus mutans UA159

41.026

89.313

0.366

Multiple sequence alignment