Detailed information NTG1067793

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACH9XF_RS14605
• Genome accession: NZ_CP172436
• Coordinates: 3148248..3149621 (+)
• Length: 457 a.a.
• NCBI ID: WP_111108606.1
• Uniprot ID: -
• Organism: Stenotrophomonas maltophilia strain SM1053
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3143248..3154621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH9XF_RS14590	sucD	3144150..3145025 (-)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-
ACH9XF_RS14595	sucC	3145047..3146216 (-)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
ACH9XF_RS14600	-	3146574..3148187 (+)	1614	WP_005414304.1	PAS domain-containing sensor histidine kinase	-
ACH9XF_RS14605	pilR	3148248..3149621 (+)	1374	WP_111108606.1	sigma-54 dependent transcriptional regulator	Regulator
ACH9XF_RS14610	pilB	3149732..3151465 (-)	1734	WP_049403029.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACH9XF_RS14615	-	3151688..3152137 (-)	450	WP_275043866.1	pilin	-
ACH9XF_RS14620	-	3152248..3152670 (-)	423	WP_049403031.1	pilin	-
ACH9XF_RS14625	pilC	3153023..3154282 (+)	1260	WP_049403032.1	type II secretion system F family protein	Machinery gene

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49545.79 Da
• Isoelectric Point: 6.4407

>NTDB_id=1067793 ACH9XF_RS14605 WP_111108606.1 3148248..3149621(+) (pilR) [Stenotrophomonas maltophilia strain SM1053]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNAERPAPGPNAEQGGRLLGHSQAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRTPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=1067793 ACH9XF_RS14605 WP_111108606.1 3148248..3149621(+) (pilR) [Stenotrophomonas maltophilia strain SM1053]
ATGAATGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCCGCCAACCTGGCCGAGGCACGTGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCCGATGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCATTCGGCAGCATGGATCTCGCCGTGGAGGCACTGAAGGCCGGTGCGTTCGATTTCGTCAGCAAGCCGGT
GGACATCTCGGTGCTGCGCGGACTGGTCAAGCACGCGCTGGAACTCAACAACGCCGAGCGCCCCGCACCGGGCCCCAACG
CCGAACAGGGCGGGCGCCTGCTGGGCCACTCGCAGGCCATGGATGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAGTCGGGCGTCGGCAAGGAGCTGGTTGCACGCACCATCCATGCCCAGGGTGCACG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGTTTCAGCGGCGCGCACGCTGACAAGCCTGGCCTGTTCCAGGCTGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCTGAACTGCCACTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGCGCGGTGGGTGCGGC
CAACGAGGAGCCAGTGGATGTCCGCATCCTCTCGGCCACCCACAAGGATCTGGCCGAGCTGGTCGAGGACGGCCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAAGGTGCCGCCGCTGCGCGAGCGCCGCCAGGACCTGCCCGAA
CTGGCCGCCGCCGTGCTGGCCCGCCTGGCCCGCAGCCACGGCCGCGCCACCCCGCTGCTGGCGCCCTCGGCGCTGGAAGC
ACTGGCGCAGTACGCGTTCCCGGGCAATGTGCGCGAGCTGGAGAACATCCTGGAACGTGCGCTGGCCCTGGCCGAGGAAG
ACTGCATCGGCGCCGATGACCTGCGCCTGCCGCAGCACGCGCCGCGTACGCCGGGCAGTGCCGCGCCCGCCGAAGCGGTG
GCCGACCTGCAGCCGGGCAGCGCCGCACTGCCCTCCTACATCGAGCAGCTCGAGCGCAGCGCCATCCAGCGTGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACCGCCGCGCAGCTGGGCATCACCTTCCGTGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.555	99.344	0.621
pilR	Acinetobacter baumannii strain A118	47.948	100	0.486