Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ACH5DO_RS13375 | Genome accession | NZ_CP172432 |
| Coordinates | 2740319..2740618 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain DG29 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2735319..2745618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH5DO_RS13335 (ACH5DO_13335) | - | 2735380..2735583 (+) | 204 | WP_000087559.1 | YqgQ family protein | - |
| ACH5DO_RS13340 (ACH5DO_13340) | - | 2735580..2736566 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ACH5DO_RS13345 (ACH5DO_13345) | - | 2736566..2736895 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACH5DO_RS13350 (ACH5DO_13350) | - | 2736892..2737515 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| ACH5DO_RS13355 (ACH5DO_13355) | comGA | 2737567..2738541 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACH5DO_RS13360 (ACH5DO_13360) | comGB | 2738513..2739583 (+) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACH5DO_RS13365 (ACH5DO_13365) | comGC | 2739597..2739908 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACH5DO_RS13370 (ACH5DO_13370) | comGD | 2739886..2740332 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACH5DO_RS13375 (ACH5DO_13375) | comGE | 2740319..2740618 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| ACH5DO_RS13380 (ACH5DO_13380) | comGF | 2740536..2741033 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACH5DO_RS13385 (ACH5DO_13385) | - | 2741130..2741276 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACH5DO_RS13390 (ACH5DO_13390) | - | 2741266..2741790 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| ACH5DO_RS13395 (ACH5DO_13395) | gcvT | 2741949..2743040 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACH5DO_RS13400 (ACH5DO_13400) | gcvPA | 2743060..2744406 (+) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=1067780 ACH5DO_RS13375 WP_000844413.1 2740319..2740618(+) (comGE) [Staphylococcus aureus strain DG29]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1067780 ACH5DO_RS13375 WP_000844413.1 2740319..2740618(+) (comGE) [Staphylococcus aureus strain DG29]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |