Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACFSN5_RS10425 Genome accession   NZ_CP172427
Coordinates   2259105..2259875 (+) Length   256 a.a.
NCBI ID   WP_165212588.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2254105..2264875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS10415 (ACFSN5_10415) rlmH 2256805..2257284 (-) 480 WP_165212584.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACFSN5_RS10420 (ACFSN5_10420) htrA 2257482..2258687 (+) 1206 WP_165212586.1 S1C family serine protease Regulator
  ACFSN5_RS10425 (ACFSN5_10425) spo0J 2259105..2259875 (+) 771 WP_165212588.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 256 a.a.        Molecular weight: 29254.87 Da        Isoelectric Point: 9.7682

>NTDB_id=1067699 ACFSN5_RS10425 WP_165212588.1 2259105..2259875(+) (spo0J) [Streptococcus sp. ZJ 1593]
MTVELKELNLNEIYPNPFQPRLSFKQKELEELADSIKENGLIQPIIVRKSPIIGYELIAGERRFRACQLAHLQTIPAIIK
ELSDQDSRIQAIIENLQRSNLNPIEEAKAYRDLIETNQMTHEEIAKYMGKSRPYITNFLRLLNLSDSLQTALEDGSLSSG
HARLLLGLSDKEQEAWLKRIKAEGLSVRALEKLLKPKNNPKYSVKKQNIFKKDLEKELTKSLGIPVTINMANNQSGKIVI
HFSSSEELNRIINKLK

Nucleotide


Download         Length: 771 bp        

>NTDB_id=1067699 ACFSN5_RS10425 WP_165212588.1 2259105..2259875(+) (spo0J) [Streptococcus sp. ZJ 1593]
ATGACTGTAGAACTAAAAGAGTTAAATTTAAACGAAATATATCCCAATCCTTTTCAACCTCGTTTAAGTTTTAAACAAAA
GGAATTGGAAGAGTTAGCAGACTCCATCAAAGAGAATGGTCTCATTCAGCCGATTATTGTCCGAAAATCACCTATCATTG
GCTATGAATTAATTGCGGGTGAGCGGCGTTTTAGGGCTTGTCAGCTGGCCCATTTACAAACAATTCCAGCGATTATTAAG
GAACTTTCAGACCAAGATAGTCGTATTCAAGCGATTATTGAGAACTTACAGCGGTCTAACCTCAATCCTATTGAGGAAGC
CAAGGCTTATCGAGACTTGATTGAAACCAACCAGATGACTCATGAGGAAATCGCTAAATATATGGGGAAATCCCGCCCTT
ACATCACTAATTTTTTACGTCTTCTTAATTTATCTGACTCTTTGCAAACAGCTTTGGAAGATGGCAGTCTATCTTCTGGC
CATGCACGCCTCTTGCTGGGCTTAAGCGATAAAGAACAAGAAGCTTGGTTAAAGAGAATTAAAGCTGAAGGACTATCGGT
CAGAGCTTTAGAAAAATTACTCAAGCCCAAAAATAATCCCAAATACTCGGTCAAAAAGCAGAATATTTTTAAAAAAGATT
TGGAGAAAGAACTGACCAAATCTTTGGGAATTCCCGTTACCATAAACATGGCTAACAATCAATCAGGTAAGATAGTCATT
CATTTTTCATCCTCAGAAGAGTTAAACAGAATTATCAACAAGCTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.594

100

0.586


Multiple sequence alignment