Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   ACHGMI_RS18470 Genome accession   NZ_CP172417
Coordinates   3365556..3367517 (+) Length   653 a.a.
NCBI ID   WP_276569535.1    Uniprot ID   -
Organism   Bacillus subtilis strain AKPS2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3360556..3372517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHGMI_RS18440 - 3361601..3361990 (+) 390 WP_017695533.1 DUF2283 domain-containing protein -
  ACHGMI_RS18445 - 3362031..3362266 (-) 236 Protein_3570 YuzF family protein -
  ACHGMI_RS18450 - 3362441..3362971 (-) 531 WP_017695534.1 HD domain-containing protein -
  ACHGMI_RS18455 - 3363169..3363900 (-) 732 WP_017695535.1 (S)-benzoin forming benzil reductase -
  ACHGMI_RS18460 essA 3363963..3364418 (-) 456 WP_010886603.1 type VII secretion protein EssA -
  ACHGMI_RS18465 - 3364450..3365556 (-) 1107 Protein_3574 type VII secretion protein EsaA -
  ACHGMI_RS18470 comP 3365556..3367517 (+) 1962 WP_276569535.1 histidine kinase Regulator
  ACHGMI_RS18475 comA 3367598..3368242 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACHGMI_RS18480 - 3368261..3368641 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  ACHGMI_RS18485 mnhG 3368680..3369054 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ACHGMI_RS18490 - 3369038..3369322 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACHGMI_RS18495 - 3369322..3369798 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ACHGMI_RS18500 - 3369804..3371285 (-) 1482 WP_017695527.1 Na+/H+ antiporter subunit D -
  ACHGMI_RS18505 - 3371278..3371619 (-) 342 WP_014480700.1 Na(+)/H(+) antiporter subunit C -
  ACHGMI_RS18510 - 3371619..3372050 (-) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 653 a.a.        Molecular weight: 76095.33 Da        Isoelectric Point: 8.9166

>NTDB_id=1067612 ACHGMI_RS18470 WP_276569535.1 3365556..3367517(+) (comP) [Bacillus subtilis strain AKPS2]
MYLIPVISYSICLFCIFFIYRINKVRKSTSAYILILFLLFVSVAYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKY
FIELGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSNLNLISFFVLVLTVSILIHKGIRKFKQKEQKSILKVLA
YTNIFSFSPFIVFFAVPYVFFEKYVSPFSLAAFTLVIPFSLVYQFMTNRLYNIDFVVGRLKYYGFLAITPTIIVVTIFNY
IQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEKFNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNI
DNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKIKEFKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEI
AWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGD
FKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLD
SQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETS
EGKGFKADIEIEL

Nucleotide


Download         Length: 1962 bp        

>NTDB_id=1067612 ACHGMI_RS18470 WP_276569535.1 3365556..3367517(+) (comP) [Bacillus subtilis strain AKPS2]
ATGTATCTCATTCCTGTAATATCTTATTCAATCTGTTTATTTTGTATATTTTTTATTTATAGAATAAATAAAGTAAGAAA
ATCAACTTCTGCTTATATTTTAATTTTATTTTTGTTATTTGTATCAGTAGCGTATGTAAGTGCATGTGGAGCAAGAAGAG
GTGAAGAGATAAGCACTTATCTGCTTGTTCTTACTTTAGTCAGTTGTCCGGTGTTATATATTCATTTTATATATAAATAC
TTTATAGAATTAGGAACAAAGTTATTCGAAAAGAAGATTTTAATCATTATGTATATGCTCCCGCTAATAAATCTTTTATT
AGAGGACGTTCTGAGTAATAGATTAAAATCTTCGGCTTTTTTGTCTAATCTGAATTTGATTTCATTTTTTGTCCTAGTTC
TTACTGTATCGATTCTTATCCATAAAGGGATAAGAAAATTTAAACAAAAAGAGCAAAAGTCAATTTTGAAAGTCCTTGCT
TATACAAATATCTTTTCTTTCAGTCCGTTTATTGTCTTTTTTGCTGTTCCATATGTGTTTTTCGAGAAGTATGTCTCACC
TTTTAGTTTGGCTGCTTTTACACTTGTTATACCTTTTTCTTTAGTATATCAATTTATGACTAATAGACTTTATAATATCG
ACTTTGTTGTGGGGCGGCTTAAGTACTACGGTTTTTTAGCCATTACACCTACTATTATCGTAGTGACCATCTTTAATTAC
ATTCAGCAACCAAAGGATATCTTTTATTTAGTTAAACTAACAATTGCAATATATGTTCTTATGTTTGCCGTTTTTTACTT
TAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAATTTAATTATCAAGATGGGATTTTTAAATTTA
CTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTTTAAAAATACAATCCTAGAAGTATTAAACATA
GATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTAGTAAGAACAACTTTAAAGATTTGACTTATAA
AAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATTAAAGAGTTTAAACAAGGTTTTATTATTAAAA
TAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTATAATACTTTTAAATTAACAAGGGATGAAATT
GCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACGTTATGAAAATCGAAGAATTGATGGTGCATCT
TGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAAGAAAAACAACGCTCGG
ATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGAGCTGTTTTTGGGTGAT
TTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGCAGATGTCTGATGTGAT
TTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTCAAGGCGCTGTCGAAGC
TGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGGAGATTTACGGCTTCCCTTGATCTGGAT
TCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGGCGACGGATGTGCTGAT
TATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGCGTAGGATTTGATCAGGAAAAGAATACTG
AGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGT
GAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(452-522)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(563-649)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.586

98.469

0.606

Multiple sequence alignment