Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACHZEV_RS10840 | Genome accession | NZ_CP172401 |
| Coordinates | 2251828..2252223 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain M22.2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2246828..2257223
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACHZEV_RS10815 (ACHZEV_10815) | - | 2247997..2248401 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ACHZEV_RS10820 (ACHZEV_10820) | - | 2249054..2249287 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACHZEV_RS10825 (ACHZEV_10825) | murA | 2249398..2250663 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACHZEV_RS10830 (ACHZEV_10830) | fabZ | 2250697..2251137 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACHZEV_RS10835 (ACHZEV_10835) | - | 2251194..2251634 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| ACHZEV_RS10840 (ACHZEV_10840) | ssb | 2251828..2252223 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACHZEV_RS10845 (ACHZEV_10845) | sceD | 2252612..2253307 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| ACHZEV_RS10850 (ACHZEV_10850) | tenA | 2253694..2254383 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| ACHZEV_RS10855 (ACHZEV_10855) | thiD | 2254376..2255206 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACHZEV_RS10860 (ACHZEV_10860) | thiM | 2255190..2255981 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| ACHZEV_RS10865 (ACHZEV_10865) | thiE | 2255983..2256624 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1067356 ACHZEV_RS10840 WP_000932694.1 2251828..2252223(+) (ssb) [Staphylococcus aureus strain M22.2]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1067356 ACHZEV_RS10840 WP_000932694.1 2251828..2252223(+) (ssb) [Staphylococcus aureus strain M22.2]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |