Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | ACH6FT_RS03615 | Genome accession | NZ_CP172387 |
| Coordinates | 716379..716684 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain YH510 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 711379..721684
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FT_RS03580 (ACH6FT_03580) | - | 711794..712555 (+) | 762 | WP_025431509.1 | ATP-binding protein | - |
| ACH6FT_RS03585 (ACH6FT_03585) | - | 712552..713235 (+) | 684 | WP_002777124.1 | 3-methyladenine DNA glycosylase | - |
| ACH6FT_RS03590 (ACH6FT_03590) | thiD | 713235..714047 (+) | 813 | WP_002797568.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACH6FT_RS03595 (ACH6FT_03595) | thiE | 714037..714669 (+) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| ACH6FT_RS03600 (ACH6FT_03600) | - | 714647..715276 (+) | 630 | WP_002795166.1 | uroporphyrinogen-III synthase | - |
| ACH6FT_RS03605 (ACH6FT_03605) | - | 715269..715721 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| ACH6FT_RS03610 (ACH6FT_03610) | - | 715718..716386 (-) | 669 | WP_002777103.1 | hypothetical protein | - |
| ACH6FT_RS03615 (ACH6FT_03615) | ctsT | 716379..716684 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| ACH6FT_RS03620 (ACH6FT_03620) | proC | 716681..717418 (-) | 738 | WP_002787902.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| ACH6FT_RS03625 (ACH6FT_03625) | fliW | 717418..717807 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| ACH6FT_RS03630 (ACH6FT_03630) | - | 717971..718618 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| ACH6FT_RS03635 (ACH6FT_03635) | lon | 718634..721009 (+) | 2376 | WP_002777089.1 | endopeptidase La | - |
| ACH6FT_RS03640 (ACH6FT_03640) | rpsR | 721065..721325 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=1067192 ACH6FT_RS03615 WP_002777852.1 716379..716684(-) (ctsT) [Campylobacter coli strain YH510]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=1067192 ACH6FT_RS03615 WP_002777852.1 716379..716684(-) (ctsT) [Campylobacter coli strain YH510]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |