Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   ACH6FQ_RS02930 Genome accession   NZ_CP172383
Coordinates   559494..560144 (-) Length   216 a.a.
NCBI ID   WP_002855187.1    Uniprot ID   A0A3H9FWN6
Organism   Campylobacter jejuni strain YH004     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 554494..565144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FQ_RS02895 (ACH6FQ_02895) - 554872..555876 (+) 1005 WP_002852264.1 membrane protein -
  ACH6FQ_RS02900 (ACH6FQ_02900) tlyA 555873..556634 (+) 762 WP_002852328.1 TlyA family RNA methyltransferase -
  ACH6FQ_RS02905 (ACH6FQ_02905) ribF 556600..557454 (+) 855 WP_002872056.1 bifunctional riboflavin kinase/FAD synthetase -
  ACH6FQ_RS02910 (ACH6FQ_02910) cmoA 557441..558151 (+) 711 WP_079254426.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  ACH6FQ_RS02915 (ACH6FQ_02915) - 558141..558362 (-) 222 WP_002859102.1 EexN family lipoprotein -
  ACH6FQ_RS02920 (ACH6FQ_02920) - 558359..558793 (-) 435 WP_002868091.1 EexN family lipoprotein -
  ACH6FQ_RS02925 (ACH6FQ_02925) - 558851..559483 (-) 633 WP_002874216.1 trimeric intracellular cation channel family protein -
  ACH6FQ_RS02930 (ACH6FQ_02930) CJE0566 559494..560144 (-) 651 WP_002855187.1 DNA/RNA non-specific endonuclease Regulator
  ACH6FQ_RS02935 (ACH6FQ_02935) nth 560141..560767 (-) 627 WP_002852225.1 endonuclease III -
  ACH6FQ_RS02940 (ACH6FQ_02940) peb4 560848..561669 (+) 822 WP_002879177.1 peptidylprolyl isomerase PEB4 -
  ACH6FQ_RS02945 (ACH6FQ_02945) fbaA 561669..562733 (+) 1065 WP_002856965.1 class II fructose-bisphosphate aldolase -
  ACH6FQ_RS02950 (ACH6FQ_02950) - 562828..564270 (+) 1443 WP_002906136.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25505.26 Da        Isoelectric Point: 9.7361

>NTDB_id=1067103 ACH6FQ_RS02930 WP_002855187.1 559494..560144(-) (CJE0566) [Campylobacter jejuni strain YH004]
MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEASNLKDKQIKKRPRFED
DTNIPKKYRTTWSDYKNSGYTRGHTAPNASFSFSKAAQNSVFLMSNITPQIAQINNKIWNEIEQRERNLAFKFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1067103 ACH6FQ_RS02930 WP_002855187.1 559494..560144(-) (CJE0566) [Campylobacter jejuni strain YH004]
ATGAAAATTTTCATCTTTTTACTCACTATATCTCTTAATATTTTTGCCTTAGAACCTTACAAGCCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GCACAAAAGCCGTTGCTTATAAAGTAGAGGCTTCAAATTTGAAAGATAAACAAATCAAAAAACGCCCTCGCTTTGAAGAT
GATACAAATATACCTAAAAAATACCGCACTACTTGGAGTGATTATAAAAACAGTGGTTACACACGAGGACACACTGCACC
CAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGCAATATTACCCCACAAATTGCACAAA
TAAATAATAAAATTTGGAATGAAATCGAGCAAAGAGAAAGAAATTTGGCTTTCAAATTTCAAAGTATCGAAGTTTTAAAT
TTAGTACTTTACGATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATGTAAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGTACCAAACCATGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3H9FWN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

70.558

91.204

0.644
  CJE1441 Campylobacter jejuni RM1221

69.543

91.204

0.634

Multiple sequence alignment