Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   ACH6FY_RS06940 Genome accession   NZ_CP172382
Coordinates   1299722..1300372 (-) Length   216 a.a.
NCBI ID   WP_085105318.1    Uniprot ID   A0A622RBD1
Organism   Campylobacter jejuni strain YH006     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1294722..1305372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FY_RS06895 (ACH6FY_06895) - 1294766..1295611 (-) 846 WP_057042792.1 BspA family leucine-rich repeat surface protein -
  ACH6FY_RS06900 (ACH6FY_06900) - 1295626..1296630 (-) 1005 WP_002897876.1 toxic anion resistance protein -
  ACH6FY_RS06905 (ACH6FY_06905) - 1297020..1297196 (-) 177 WP_153605208.1 hypothetical protein -
  ACH6FY_RS06910 (ACH6FY_06910) - 1297291..1297518 (-) 228 WP_052783806.1 hypothetical protein -
  ACH6FY_RS06915 (ACH6FY_06915) - 1297546..1298010 (-) 465 WP_395766343.1 hypothetical protein -
  ACH6FY_RS06920 (ACH6FY_06920) - 1298029..1298526 (-) 498 WP_052783808.1 hypothetical protein -
  ACH6FY_RS06925 (ACH6FY_06925) - 1298572..1298739 (-) 168 WP_223209703.1 hypothetical protein -
  ACH6FY_RS06930 (ACH6FY_06930) - 1298789..1299316 (-) 528 WP_395766344.1 hypothetical protein -
  ACH6FY_RS06935 (ACH6FY_06935) - 1299324..1299542 (-) 219 WP_002801018.1 hypothetical protein -
  ACH6FY_RS06940 (ACH6FY_06940) CJE0566 1299722..1300372 (-) 651 WP_085105318.1 DNA/RNA non-specific endonuclease Regulator
  ACH6FY_RS06945 (ACH6FY_06945) - 1300391..1301038 (-) 648 WP_085105332.1 hypothetical protein -
  ACH6FY_RS06950 (ACH6FY_06950) - 1301053..1301271 (-) 219 WP_070273888.1 hypothetical protein -
  ACH6FY_RS06955 (ACH6FY_06955) - 1301268..1301747 (-) 480 WP_070273887.1 hypothetical protein -
  ACH6FY_RS06960 (ACH6FY_06960) - 1301779..1302012 (-) 234 WP_070315481.1 hypothetical protein -
  ACH6FY_RS06965 (ACH6FY_06965) - 1302005..1302160 (-) 156 WP_395766392.1 hypothetical protein -
  ACH6FY_RS06970 (ACH6FY_06970) - 1302343..1302693 (-) 351 WP_002840065.1 hypothetical protein -
  ACH6FY_RS06975 (ACH6FY_06975) - 1302690..1302881 (-) 192 WP_002840066.1 hypothetical protein -
  ACH6FY_RS06980 (ACH6FY_06980) - 1302883..1303551 (-) 669 WP_052783815.1 hypothetical protein -
  ACH6FY_RS06985 (ACH6FY_06985) - 1303557..1303907 (-) 351 WP_002875041.1 hypothetical protein -
  ACH6FY_RS06990 (ACH6FY_06990) - 1303907..1304317 (-) 411 WP_052805354.1 YopX family protein -
  ACH6FY_RS06995 (ACH6FY_06995) - 1304304..1304579 (-) 276 WP_052805355.1 hypothetical protein -
  ACH6FY_RS07000 (ACH6FY_07000) - 1304634..1304855 (-) 222 WP_002821399.1 hypothetical protein -
  ACH6FY_RS07005 (ACH6FY_07005) - 1304839..1305255 (-) 417 WP_395766345.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25508.01 Da        Isoelectric Point: 9.7865

>NTDB_id=1067085 ACH6FY_RS06940 WP_085105318.1 1299722..1300372(-) (CJE0566) [Campylobacter jejuni strain YH006]
MKKLMILPLLATLAFADYTQYKPSEDFAKYFTKQSCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYVKILKGDNFKECYQVPNHEVEDESIRSYQIKCQF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1067085 ACH6FY_RS06940 WP_085105318.1 1299722..1300372(-) (CJE0566) [Campylobacter jejuni strain YH006]
ATGAAAAAACTTATGATTTTACCGTTGCTAGCAACTCTAGCTTTTGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGACACACTCT
TTCTAATGCTTCAATGCGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCGCAAAGAATAAGAAATCAAATTGCCATTCCAAGCTCTTATGTTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGATCTTATCAGATCAAGT
GTCAATTCTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A622RBD1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

93.458

99.074

0.926
  CJE1441 Campylobacter jejuni RM1221

92.056

99.074

0.912

Multiple sequence alignment