Detailed information
Bioinformatically predicted
Overview
| Name | ctsP | Type | Machinery gene |
| Locus tag | ACH6FR_RS07570 | Genome accession | NZ_CP172379 |
| Coordinates | 1450704..1451312 (-) | Length | 202 a.a. |
| NCBI ID | WP_002851464.1 | Uniprot ID | A0AB36GA54 |
| Organism | Campylobacter jejuni strain YH013 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1445704..1456312
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FR_RS07545 (ACH6FR_07545) | - | 1445861..1446625 (+) | 765 | WP_002851318.1 | TIGR02757 family protein | - |
| ACH6FR_RS07550 (ACH6FR_07550) | - | 1446629..1447393 (+) | 765 | WP_002855821.1 | TSUP family transporter | - |
| ACH6FR_RS07555 (ACH6FR_07555) | ctsF | 1447386..1448567 (-) | 1182 | WP_002868229.1 | type II secretion system F family protein | Machinery gene |
| ACH6FR_RS07560 (ACH6FR_07560) | ctsE | 1448564..1450123 (-) | 1560 | WP_020247122.1 | GspE/PulE family protein | Machinery gene |
| ACH6FR_RS07565 (ACH6FR_07565) | ctsX | 1450113..1450700 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| ACH6FR_RS07570 (ACH6FR_07570) | ctsP | 1450704..1451312 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| ACH6FR_RS07575 (ACH6FR_07575) | ctsD | 1451305..1452717 (-) | 1413 | WP_002855316.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| ACH6FR_RS07580 (ACH6FR_07580) | ctsR | 1452695..1453006 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 202 a.a. Molecular weight: 23742.78 Da Isoelectric Point: 9.9955
>NTDB_id=1067011 ACH6FR_RS07570 WP_002851464.1 1450704..1451312(-) (ctsP) [Campylobacter jejuni strain YH013]
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
MSKIIPFREEIFHQINQILESQKAFIFLWGKSGSGKSVLLQRLAKKYNVDFINENFKDQSFLKEKIEFLISQGQSLIILD
EVGMYDYAMLESIRIYSDSISFVLSSHKKLNILKKEHFKSRLSACFKLKNISLLELDDYIKLKFGMNFSNKCLKFLQKIS
QGNLRYIDKTLKSFYEINSFFDKNKSQEYILKLSALENGLLR
Nucleotide
Download Length: 609 bp
>NTDB_id=1067011 ACH6FR_RS07570 WP_002851464.1 1450704..1451312(-) (ctsP) [Campylobacter jejuni strain YH013]
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTTGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
ATGAGTAAAATTATTCCATTTAGAGAAGAAATTTTTCATCAAATCAATCAAATTTTAGAAAGCCAAAAAGCTTTTATTTT
TTTATGGGGAAAAAGTGGTAGTGGTAAAAGTGTATTGTTGCAAAGATTGGCAAAAAAATATAATGTTGATTTTATTAATG
AAAATTTTAAAGATCAGAGTTTCTTAAAAGAAAAAATTGAGTTTTTGATTTCACAAGGTCAGAGTTTAATCATTCTTGAT
GAAGTGGGAATGTATGATTATGCAATGCTAGAAAGCATCAGGATTTATAGTGATTCTATAAGTTTTGTTTTAAGTTCTCA
TAAAAAGTTAAATATACTTAAAAAAGAGCATTTTAAAAGTCGTTTAAGTGCTTGTTTTAAATTGAAAAATATTAGTCTTT
TAGAACTTGATGATTATATTAAATTGAAATTTGGAATGAATTTTTCAAATAAATGTCTTAAGTTTTTACAAAAAATTTCT
CAAGGAAATTTAAGATATATTGATAAAACTTTAAAAAGTTTTTATGAGATAAATAGTTTTTTTGATAAAAACAAAAGTCA
AGAGTATATTTTAAAGCTTAGTGCTTTAGAGAATGGCTTATTAAGGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsP | Campylobacter jejuni subsp. jejuni 81-176 |
99.505 |
100 |
0.995 |