Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   ACH6FF_RS03190 Genome accession   NZ_CP172356
Coordinates   599475..600125 (-) Length   216 a.a.
NCBI ID   WP_002923759.1    Uniprot ID   A0A5T0IQG5
Organism   Campylobacter jejuni strain YH025     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 594475..605125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FF_RS03155 (ACH6FF_03155) - 594853..595857 (+) 1005 WP_079269915.1 hypothetical protein -
  ACH6FF_RS03160 (ACH6FF_03160) tlyA 595854..596615 (+) 762 WP_002854799.1 TlyA family RNA methyltransferase -
  ACH6FF_RS03165 (ACH6FF_03165) ribF 596581..597435 (+) 855 WP_002873780.1 bifunctional riboflavin kinase/FAD synthetase -
  ACH6FF_RS03170 (ACH6FF_03170) cmoA 597422..598132 (+) 711 WP_079462504.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  ACH6FF_RS03175 (ACH6FF_03175) - 598122..598343 (-) 222 WP_002859102.1 EexN family lipoprotein -
  ACH6FF_RS03180 (ACH6FF_03180) - 598340..598774 (-) 435 WP_002855128.1 EexN family lipoprotein -
  ACH6FF_RS03185 (ACH6FF_03185) - 598832..599464 (-) 633 WP_002870070.1 trimeric intracellular cation channel family protein -
  ACH6FF_RS03190 (ACH6FF_03190) CJE0566 599475..600125 (-) 651 WP_002923759.1 DNA/RNA non-specific endonuclease Regulator
  ACH6FF_RS03195 (ACH6FF_03195) nth 600122..600748 (-) 627 WP_002852225.1 endonuclease III -
  ACH6FF_RS03200 (ACH6FF_03200) peb4 600829..601650 (+) 822 WP_002852119.1 peptidylprolyl isomerase PEB4 -
  ACH6FF_RS03205 (ACH6FF_03205) fbaA 601650..602714 (+) 1065 WP_002923762.1 class II fructose-bisphosphate aldolase -
  ACH6FF_RS03210 (ACH6FF_03210) - 602809..604251 (+) 1443 WP_002875368.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25532.25 Da        Isoelectric Point: 9.9028

>NTDB_id=1066721 ACH6FF_RS03190 WP_002923759.1 599475..600125(-) (CJE0566) [Campylobacter jejuni strain YH025]
MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFED
DTNIPKKYRTTWSNYKNSGYTRGHTAPNASFSFSKAAQNSVFLMSNITPQNAQINNKIWNEIEQRERNLAFKFQSIEVLN
LVLYNKEPQYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1066721 ACH6FF_RS03190 WP_002923759.1 599475..600125(-) (CJE0566) [Campylobacter jejuni strain YH025]
ATGAAAATTTTCATCTTTTTACTCACTATATCTCTTAATATTTTTGCCTTAGAACCTTACAAGCCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GCACAAAAGCTGTTGCTTATAAGGTAGAAGCTTCAAATTTGAAAGATAGACAAATCAAAAAACGCCCTCGCTTTGAAGAT
GATACAAATATTCCTAAAAAATACCGCACTACTTGGAGTAATTATAAAAACAGTGGTTACACACGAGGACACACTGCACC
CAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATTACCCCACAAAATGCACAAA
TAAATAATAAAATTTGGAATGAAATCGAGCAAAGAGAAAGAAATTTGGCTTTCAAATTCCAAAGTATCGAAGTTTTAAAT
TTAGTACTTTACAATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATGTAAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGTACCAAACCATGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0IQG5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

70.051

91.204

0.639
  CJE1441 Campylobacter jejuni RM1221

69.036

91.204

0.63

Multiple sequence alignment