Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | ACH6FF_RS02540 | Genome accession | NZ_CP172356 |
| Coordinates | 480295..480954 (-) | Length | 219 a.a. |
| NCBI ID | WP_052819883.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain YH025 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 468137..498160 | 480295..480954 | within | 0 |
Gene organization within MGE regions
Location: 468137..498160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH6FF_RS02440 (ACH6FF_02440) | - | 468137..469339 (+) | 1203 | WP_002874346.1 | site-specific integrase | - |
| ACH6FF_RS02445 (ACH6FF_02445) | - | 469336..469506 (-) | 171 | WP_002864902.1 | AlpA family transcriptional regulator | - |
| ACH6FF_RS02450 (ACH6FF_02450) | - | 469499..470041 (-) | 543 | WP_002801905.1 | pentapeptide repeat-containing protein | - |
| ACH6FF_RS02455 (ACH6FF_02455) | - | 470043..470753 (-) | 711 | WP_052789479.1 | Rha family transcriptional regulator | - |
| ACH6FF_RS02460 (ACH6FF_02460) | - | 470884..471519 (-) | 636 | WP_224385547.1 | toxin-antitoxin system HicB family antitoxin | - |
| ACH6FF_RS02465 (ACH6FF_02465) | - | 471530..472369 (-) | 840 | WP_002861640.1 | hypothetical protein | - |
| ACH6FF_RS02470 (ACH6FF_02470) | - | 472423..473175 (-) | 753 | WP_052819867.1 | site-specific DNA-methyltransferase | - |
| ACH6FF_RS02475 (ACH6FF_02475) | - | 473178..473513 (-) | 336 | WP_002874350.1 | hypothetical protein | - |
| ACH6FF_RS02480 (ACH6FF_02480) | - | 473516..473956 (-) | 441 | WP_002801610.1 | YopX family protein | - |
| ACH6FF_RS02485 (ACH6FF_02485) | - | 473937..474215 (-) | 279 | WP_002874351.1 | hypothetical protein | - |
| ACH6FF_RS02490 (ACH6FF_02490) | - | 474196..474894 (-) | 699 | WP_057041431.1 | hypothetical protein | - |
| ACH6FF_RS02495 (ACH6FF_02495) | - | 474894..475631 (-) | 738 | WP_002873576.1 | hypothetical protein | - |
| ACH6FF_RS02500 (ACH6FF_02500) | - | 475633..476487 (-) | 855 | WP_011049697.1 | lambda-exonuclease family protein | - |
| ACH6FF_RS02505 (ACH6FF_02505) | - | 476489..476716 (-) | 228 | WP_002874355.1 | helix-turn-helix domain-containing protein | - |
| ACH6FF_RS02510 (ACH6FF_02510) | - | 476707..476964 (-) | 258 | WP_002865124.1 | hypothetical protein | - |
| ACH6FF_RS02515 (ACH6FF_02515) | - | 476955..477224 (-) | 270 | WP_002874357.1 | hypothetical protein | - |
| ACH6FF_RS02520 (ACH6FF_02520) | - | 477784..478056 (-) | 273 | WP_002865126.1 | hypothetical protein | - |
| ACH6FF_RS02525 (ACH6FF_02525) | - | 478199..478456 (+) | 258 | WP_052789483.1 | hypothetical protein | - |
| ACH6FF_RS02530 (ACH6FF_02530) | - | 478529..478984 (-) | 456 | WP_052819868.1 | hypothetical protein | - |
| ACH6FF_RS02535 (ACH6FF_02535) | - | 478971..480194 (-) | 1224 | WP_052775414.1 | AAA family ATPase | - |
| ACH6FF_RS02540 (ACH6FF_02540) | CJE0566 | 480295..480954 (-) | 660 | WP_052819883.1 | DNA/RNA non-specific endonuclease | Regulator |
| ACH6FF_RS02545 (ACH6FF_02545) | - | 480974..481741 (-) | 768 | WP_052819869.1 | hypothetical protein | - |
| ACH6FF_RS02550 (ACH6FF_02550) | - | 481738..482469 (-) | 732 | WP_052819871.1 | S24 family peptidase | - |
| ACH6FF_RS02555 (ACH6FF_02555) | - | 482610..482825 (+) | 216 | WP_002865054.1 | hypothetical protein | - |
| ACH6FF_RS02560 (ACH6FF_02560) | - | 482812..483282 (+) | 471 | WP_002865055.1 | hypothetical protein | - |
| ACH6FF_RS02565 (ACH6FF_02565) | - | 483242..483619 (+) | 378 | WP_002826744.1 | hypothetical protein | - |
| ACH6FF_RS02570 (ACH6FF_02570) | - | 483616..484617 (+) | 1002 | WP_032593200.1 | hypothetical protein | - |
| ACH6FF_RS02575 (ACH6FF_02575) | - | 484628..485278 (+) | 651 | WP_002871222.1 | hypothetical protein | - |
| ACH6FF_RS02580 (ACH6FF_02580) | - | 485296..485676 (+) | 381 | WP_002788333.1 | hypothetical protein | - |
| ACH6FF_RS02585 (ACH6FF_02585) | - | 485676..486062 (+) | 387 | WP_002861661.1 | terminase small subunit | - |
| ACH6FF_RS02590 (ACH6FF_02590) | - | 486059..487351 (+) | 1293 | WP_052796701.1 | terminase | - |
| ACH6FF_RS02595 (ACH6FF_02595) | - | 487341..487613 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| ACH6FF_RS02600 (ACH6FF_02600) | - | 487594..489132 (+) | 1539 | WP_002826750.1 | hypothetical protein | - |
| ACH6FF_RS02605 (ACH6FF_02605) | - | 489125..489328 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| ACH6FF_RS02610 (ACH6FF_02610) | - | 489318..489965 (+) | 648 | WP_002874373.1 | hypothetical protein | - |
| ACH6FF_RS02615 (ACH6FF_02615) | - | 489976..490356 (+) | 381 | WP_002865493.1 | hypothetical protein | - |
| ACH6FF_RS02620 (ACH6FF_02620) | - | 490616..491755 (+) | 1140 | WP_002874375.1 | hypothetical protein | - |
| ACH6FF_RS02625 (ACH6FF_02625) | - | 491755..494749 (+) | 2995 | Protein_506 | PBECR2 nuclease fold domain-containing protein | - |
| ACH6FF_RS02630 (ACH6FF_02630) | - | 494986..496746 (+) | 1761 | Protein_507 | hypothetical protein | - |
| ACH6FF_RS02635 (ACH6FF_02635) | - | 497126..498160 (+) | 1035 | WP_002874378.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 219 a.a. Molecular weight: 25759.32 Da Isoelectric Point: 9.9171
>NTDB_id=1066720 ACH6FF_RS02540 WP_052819883.1 480295..480954(-) (CJE0566) [Campylobacter jejuni strain YH025]
MKKLILLPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQAALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIRKYKVNCGKIHI
MKKLILLPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQAALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIRKYKVNCGKIHI
Nucleotide
Download Length: 660 bp
>NTDB_id=1066720 ACH6FF_RS02540 WP_052819883.1 480295..480954(-) (CJE0566) [Campylobacter jejuni strain YH025]
GTGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTAGCTGATTACACACAATACAAGCCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGCAGCTTTGAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGAAAATATAAGGTTAATT
GTGGTAAAATTCATATTTAA
GTGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTAGCTGATTACACACAATACAAGCCAAGCGAAGATTT
TGCCAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGAGTTTGGAATAAAATTGAAAAAAGAGAAAGACAAGCAGCTTTGAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGAAAATATAAGGTTAATT
GTGGTAAAATTCATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
93.548 |
99.087 |
0.927 |
| CJE1441 | Campylobacter jejuni RM1221 |
92.991 |
97.717 |
0.909 |