Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   ACH6FH_RS03150 Genome accession   NZ_CP172349
Coordinates   600808..601458 (-) Length   216 a.a.
NCBI ID   WP_002868899.1    Uniprot ID   A0A5T1MWU6
Organism   Campylobacter jejuni strain YH029     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 595808..606458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH6FH_RS03115 (ACH6FH_03115) - 596186..597190 (+) 1005 WP_024088100.1 hypothetical protein -
  ACH6FH_RS03120 (ACH6FH_03120) tlyA 597187..597948 (+) 762 WP_002868894.1 TlyA family RNA methyltransferase -
  ACH6FH_RS03125 (ACH6FH_03125) ribF 597914..598768 (+) 855 WP_011812722.1 bifunctional riboflavin kinase/FAD synthetase -
  ACH6FH_RS03130 (ACH6FH_03130) cmoA 598755..599465 (+) 711 WP_079254181.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  ACH6FH_RS03135 (ACH6FH_03135) - 599455..599676 (-) 222 WP_079005306.1 EexN family lipoprotein -
  ACH6FH_RS03140 (ACH6FH_03140) - 599667..600107 (-) 441 WP_002868898.1 EexN family lipoprotein -
  ACH6FH_RS03145 (ACH6FH_03145) - 600165..600797 (-) 633 WP_002852232.1 trimeric intracellular cation channel family protein -
  ACH6FH_RS03150 (ACH6FH_03150) CJE0566 600808..601458 (-) 651 WP_002868899.1 DNA/RNA non-specific endonuclease Regulator
  ACH6FH_RS03155 (ACH6FH_03155) nth 601455..602081 (-) 627 WP_002857170.1 endonuclease III -
  ACH6FH_RS03160 (ACH6FH_03160) peb4 602162..602983 (+) 822 WP_002856774.1 peptidylprolyl isomerase PEB4 -
  ACH6FH_RS03165 (ACH6FH_03165) fbaA 602983..604047 (+) 1065 WP_002856965.1 class II fructose-bisphosphate aldolase -
  ACH6FH_RS03170 (ACH6FH_03170) - 604142..605584 (+) 1443 WP_002857090.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25532.29 Da        Isoelectric Point: 9.8262

>NTDB_id=1066613 ACH6FH_RS03150 WP_002868899.1 600808..601458(-) (CJE0566) [Campylobacter jejuni strain YH029]
MKIFIFLLAISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEASNLKDKQIKKRPRFED
DTNIPKKYRTTWSDYKNSSYTRGHTAPNASFSFSKAAQNSVFLMSNITPQIAQINNKIWNEIEQRERNLAFKFQSIEVLN
LVLYDKEPQYIRNRIAIPSFYVKIIKTPKFKECYQVPNHEVNNENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=1066613 ACH6FH_RS03150 WP_002868899.1 600808..601458(-) (CJE0566) [Campylobacter jejuni strain YH029]
ATGAAAATTTTCATCTTTTTACTCGCTATATCTCTTAATATTTTTGCCTTAGAACCTTACAAACCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GCACAAAAGCCGTTGCTTATAAAGTAGAAGCTTCAAATTTAAAAGATAAACAAATCAAAAAACGCCCTCGCTTTGAAGAT
GATACAAATATTCCTAAAAAATACCGCACTACTTGGAGTGATTATAAAAACAGTAGTTACACACGAGGACACACTGCGCC
TAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGCAATATTACCCCACAAATTGCACAAA
TAAATAATAAAATTTGGAATGAAATCGAGCAAAGAGAAAGAAATTTGGCTTTCAAATTTCAAAGTATCGAGGTTTTAAAT
TTGGTACTTTACGATAAAGAACCACAATACATTAGAAACCGTATTGCTATACCAAGTTTTTATGTAAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGTACCAAACCATGAAGTAAATAATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T1MWU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

70.051

91.204

0.639
  CJE1441 Campylobacter jejuni RM1221

69.036

91.204

0.63

Multiple sequence alignment