Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   ACHZK0_RS20260 Genome accession   NZ_CP172246
Coordinates   3964259..3965053 (-) Length   264 a.a.
NCBI ID   WP_033656399.1    Uniprot ID   A0A6I0BK65
Organism   Bacillus sp. 3G2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 3959259..3970053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHZK0_RS20240 (ACHZK0_20240) - 3960935..3961168 (+) 234 WP_001190187.1 DUF2627 domain-containing protein -
  ACHZK0_RS20245 (ACHZK0_20245) - 3961330..3962058 (-) 729 WP_262740597.1 glycerophosphodiester phosphodiesterase -
  ACHZK0_RS20250 (ACHZK0_20250) - 3962109..3962255 (+) 147 WP_016125813.1 YycC family protein -
  ACHZK0_RS20255 (ACHZK0_20255) - 3962442..3963968 (-) 1527 WP_262740596.1 glycosyltransferase family 39 protein -
  ACHZK0_RS20260 (ACHZK0_20260) spo0A 3964259..3965053 (-) 795 WP_033656399.1 sporulation transcription factor Spo0A Regulator
  ACHZK0_RS20265 (ACHZK0_20265) spoIVB 3965341..3966639 (-) 1299 WP_063260843.1 SpoIVB peptidase -
  ACHZK0_RS20270 (ACHZK0_20270) recN 3966758..3968497 (-) 1740 WP_073516461.1 DNA repair protein RecN Machinery gene
  ACHZK0_RS20275 (ACHZK0_20275) argR 3968766..3969215 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29440.13 Da        Isoelectric Point: 7.1176

>NTDB_id=1065907 ACHZK0_RS20260 WP_033656399.1 3964259..3965053(-) (spo0A) [Bacillus sp. 3G2]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLNDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=1065907 ACHZK0_RS20260 WP_033656399.1 3964259..3965053(-) (spo0A) [Bacillus sp. 3G2]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAATGATAAGCAGCCGGATGTACTTG
TTTTAGACATTATTATGCCACATTTAGATGGTCTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGCTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTTAGCGGTAAGGCGAACGCTACCATTAAACGTCCAC
TTCCATCTTTCCGCTCAGCAACGACAATAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTATATGTATTTAAGGGAAGCGATCTCTATGGTGTACAATGATATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACGACAGCAAGCCGCGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGAGGAAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I0BK65

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814


Multiple sequence alignment