Detailed information NTG1065792

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ACH105_RS18555
• Genome accession: NZ_CP172234
• Coordinates: 3948960..3950222 (-)
• Length: 420 a.a.
• NCBI ID: WP_395764082.1
• Uniprot ID: -
• Organism: Stutzerimonas balearica strain Y11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3943960..3955222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH105_RS18540 (ACH105_18540)	rpoH	3946303..3947157 (-)	855	WP_041108430.1	RNA polymerase sigma factor RpoH	-
ACH105_RS18545 (ACH105_18545)	ftsX	3947273..3948295 (-)	1023	WP_041108432.1	permease-like cell division protein FtsX	-
ACH105_RS18550 (ACH105_18550)	ftsE	3948292..3948963 (-)	672	WP_041108434.1	cell division ATP-binding protein FtsE	-
ACH105_RS18555 (ACH105_18555)	pilA	3948960..3950222 (-)	1263	WP_395764082.1	signal recognition particle-docking protein FtsY	Machinery gene
ACH105_RS18560 (ACH105_18560)	-	3950451..3951821 (+)	1371	WP_278466864.1	pitrilysin family protein	-
ACH105_RS18565 (ACH105_18565)	-	3951814..3953364 (+)	1551	WP_395764083.1	M16 family metallopeptidase	-
ACH105_RS18570 (ACH105_18570)	rsmD	3953364..3953960 (+)	597	WP_041108441.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ACH105_RS18575 (ACH105_18575)	-	3953957..3954358 (-)	402	WP_165562559.1	ribonucleotide reductase subunit alpha	-

Sequence

Protein

• Length: 420 a.a.
• Molecular weight: 44981.01 Da
• Isoelectric Point: 4.8101

>NTDB_id=1065792 ACH105_RS18555 WP_395764082.1 3948960..3950222(-) (pilA) [Stutzerimonas balearica strain Y11]
MFGSNDDKKTPAEAGEKKGLFGWLRKKPQTPAAEPPATEPPEESQPLADEPDREAEQTEREQLAEAHEAPVHEPASEPVE
PPSVQLPEPEPVPSAEPTQPTAAAPEPAAPTRLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLEELETRLLTAD
VGVEATGAIMQNLTRRVSRKELADSGALYRALQEELAGLLRPVEQPLVVDGGKQPYVILVVGVNGVGKTTTIGKLAKKLQ
NEGKKVMLAAGDTFRAAAVEQLQVWGERNRIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEELK
KVRRVIGKLDETAPHEVLLVLDAGTGQNAINQTRQFNQAVELSGIALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGID
DLRTFEADAFVKALFGQDER

Nucleotide

• Length: 1263 bp

>NTDB_id=1065792 ACH105_RS18555 WP_395764082.1 3948960..3950222(-) (pilA) [Stutzerimonas balearica strain Y11]
ATGTTTGGTTCAAACGACGACAAGAAGACGCCGGCCGAGGCCGGCGAAAAGAAAGGGCTGTTCGGCTGGTTGCGCAAGAA
GCCGCAGACGCCTGCCGCCGAGCCGCCGGCGACCGAACCGCCGGAAGAGAGCCAGCCACTGGCCGATGAGCCCGACCGCG
AAGCCGAGCAAACGGAGCGCGAGCAACTGGCCGAGGCGCACGAAGCGCCGGTGCATGAGCCCGCCTCTGAGCCGGTCGAG
CCGCCCTCGGTGCAGCTCCCCGAGCCTGAGCCTGTACCGAGTGCCGAGCCCACGCAGCCGACCGCTGCAGCACCGGAACC
CGCTGCGCCGACCCGACTGGGCTTCTTCGCCCGTTTGCGCCAGGGCCTGTCCAAGACCAGCGCCAGCATCGGCGAGGGCA
TGGCCAGTCTGTTCCTTGGCAAGAAGGCGATCGATGACGACCTGCTCGAAGAGCTGGAAACACGCCTGCTGACCGCCGAC
GTCGGCGTCGAGGCAACTGGCGCGATCATGCAGAACCTGACCCGCCGGGTCTCGCGCAAGGAGCTGGCCGACAGCGGTGC
GCTGTATCGCGCGCTGCAGGAAGAACTCGCCGGGCTGCTGCGCCCGGTCGAGCAGCCGCTGGTCGTCGATGGCGGCAAGC
AGCCCTACGTGATCCTCGTGGTCGGGGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTTGCCAAGAAGCTGCAG
AACGAAGGCAAGAAGGTCATGCTCGCCGCCGGCGATACCTTCCGCGCCGCGGCAGTCGAGCAGCTGCAGGTCTGGGGCGA
GCGCAACCGTATTCCGGTGATTGCCCAGCATACCGGCGCCGATTCCGCCTCGGTCATCTTCGATGCGGTGCAGGCGGCCA
AGGCGCGCGGCATCGACGTGCTGATCGCCGATACCGCCGGTCGTCTGCATACCAAGGACAACCTCATGGAGGAGCTGAAG
AAGGTGCGCCGGGTGATCGGCAAGCTGGACGAGACCGCGCCCCATGAAGTGCTGCTGGTGCTCGACGCCGGCACCGGGCA
AAACGCGATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTCAGTGGCATCGCCCTGACCAAGCTCGACGGCACGG
CCAAGGGCGGCGTGATCTTCGCGCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTCGGTGAAGGGATCGAC
GACCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCTCTGTTCGGTCAGGACGAGCGATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (131-196)

• SRP54-type protein, GTPase domain (SRP54) (216-415)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.227	100	0.486