Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   ACHWYG_RS09150 Genome accession   NZ_CP172082
Coordinates   1816168..1816680 (+) Length   170 a.a.
NCBI ID   WP_005648034.1    Uniprot ID   A0A2X1QPL8
Organism   Haemophilus influenzae strain GA54827     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1811168..1821680
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHWYG_RS09130 nrfF 1811468..1812622 (-) 1155 WP_118804261.1 heme lyase NrfEFG subunit NrfF -
  ACHWYG_RS09135 - 1812619..1813149 (-) 531 WP_038440114.1 DsbE family thiol:disulfide interchange protein -
  ACHWYG_RS09140 nrfE 1813149..1815056 (-) 1908 WP_118804262.1 heme lyase NrfEFG subunit NrfE -
  ACHWYG_RS09145 suhB 1815165..1815968 (-) 804 WP_005648036.1 inositol-1-monophosphatase -
  ACHWYG_RS09150 comN 1816168..1816680 (+) 513 WP_005648034.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  ACHWYG_RS09155 comO 1816680..1817396 (+) 717 WP_005648032.1 type II secretion system protein J Machinery gene
  ACHWYG_RS09160 comP 1817411..1818094 (+) 684 WP_005648030.1 DUF2572 family protein Machinery gene
  ACHWYG_RS09165 comQ 1818087..1818374 (+) 288 WP_005648029.1 DUF5374 domain-containing protein Machinery gene

Sequence

Protein


Download         Length: 170 a.a.        Molecular weight: 19850.04 Da        Isoelectric Point: 8.4863

>NTDB_id=1065034 ACHWYG_RS09150 WP_005648034.1 1816168..1816680(+) (comN) [Haemophilus influenzae strain GA54827]
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPEEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRL
KTNQFDSACN

Nucleotide


Download         Length: 513 bp        

>NTDB_id=1065034 ACHWYG_RS09150 WP_005648034.1 1816168..1816680(+) (comN) [Haemophilus influenzae strain GA54827]
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCGCCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAAGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACAGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGGAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TCGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-21)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2X1QPL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

98.824

100

0.988

Multiple sequence alignment