Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   ACHKST_RS15120 Genome accession   NZ_CP172011
Coordinates   3044729..3045373 (-) Length   214 a.a.
NCBI ID   WP_003152052.1    Uniprot ID   A3KLB8
Organism   Bacillus velezensis strain Bv.g1     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3039729..3050373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHKST_RS15085 - 3040914..3041345 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  ACHKST_RS15090 - 3041345..3041686 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ACHKST_RS15095 - 3041679..3043160 (+) 1482 WP_039254060.1 Na+/H+ antiporter subunit D -
  ACHKST_RS15100 - 3043166..3043642 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  ACHKST_RS15105 - 3043642..3043926 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  ACHKST_RS15110 mnhG 3043910..3044284 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ACHKST_RS15115 - 3044324..3044707 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  ACHKST_RS15120 comA 3044729..3045373 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  ACHKST_RS15125 comP 3045454..3047757 (-) 2304 WP_101562386.1 histidine kinase Regulator
  ACHKST_RS15130 comQ 3047910..3048842 (-) 933 WP_025650217.1 class 1 isoprenoid biosynthesis enzyme Regulator
  ACHKST_RS15135 degQ 3049027..3049167 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACHKST_RS15140 - 3049632..3049973 (+) 342 WP_014305721.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24271.68 Da        Isoelectric Point: 4.9953

>NTDB_id=1064855 ACHKST_RS15120 WP_003152052.1 3044729..3045373(-) (comA) [Bacillus velezensis strain Bv.g1]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDISGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLMTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1064855 ACHKST_RS15120 WP_003152052.1 3044729..3045373(-) (comA) [Bacillus velezensis strain Bv.g1]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTTAGTCCTGATGCCAGTGAACAATTCGTTCTCCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACATCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGCAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCATGGCGCCATCAGCAAAAC
CGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTCAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGATGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACTCCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCAGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAATAAGCTGAATGTCGGCTCCCGTACTGAAGCGGTGCTGATCGCCAAGTCAGATAACGTAC
TATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-117)

Bacterial regulatory proteins, luxR family (GerE)

(153-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

86.449

100

0.864

Multiple sequence alignment