Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACHKST_RS02005 Genome accession   NZ_CP172011
Coordinates   390279..391232 (+) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus velezensis strain Bv.g1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 385279..396232
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACHKST_RS01980 - 385322..386755 (+) 1434 WP_187297950.1 HAMP domain-containing sensor histidine kinase -
  ACHKST_RS01985 rapC 386908..388056 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  ACHKST_RS01990 phrC 388040..388159 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ACHKST_RS01995 - 388310..388420 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  ACHKST_RS02000 - 388500..389864 (-) 1365 WP_101562697.1 aspartate kinase -
  ACHKST_RS02005 ceuB 390279..391232 (+) 954 WP_003156332.1 ABC transporter permease Machinery gene
  ACHKST_RS02010 - 391222..392169 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  ACHKST_RS02015 - 392163..392921 (+) 759 WP_071392129.1 ABC transporter ATP-binding protein -
  ACHKST_RS02020 - 392943..393887 (+) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  ACHKST_RS02025 - 395239..396090 (+) 852 WP_101562699.1 DUF692 family multinuclear iron-containing protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=1064806 ACHKST_RS02005 WP_003156332.1 390279..391232(+) (ceuB) [Bacillus velezensis strain Bv.g1]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1064806 ACHKST_RS02005 WP_003156332.1 390279..391232(+) (ceuB) [Bacillus velezensis strain Bv.g1]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTTGTCAAAGGCAGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCTCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment