Detailed information NTG1064369

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACHD8M_RS17720
• Genome accession: NZ_CP171807
• Coordinates: 3513917..3515080 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain BRI3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3508917..3520080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHD8M_RS17690	-	3509182..3509601 (-)	420	WP_061861586.1	TIGR03826 family flagellar region protein	-
ACHD8M_RS17695	comFC	3509675..3510364 (-)	690	WP_201448519.1	phosphoribosyltransferase family protein	Machinery gene
ACHD8M_RS17700	-	3510370..3510654 (-)	285	WP_159354645.1	late competence development ComFB family protein	-
ACHD8M_RS17705	comFA	3510712..3512097 (-)	1386	WP_159354646.1	DEAD/DEAH box helicase	Machinery gene
ACHD8M_RS17710	-	3512205..3513053 (-)	849	WP_003151387.1	DegV family protein	-
ACHD8M_RS17715	degU	3513151..3513840 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACHD8M_RS17720	degS	3513917..3515080 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ACHD8M_RS17725	-	3515303..3515950 (+)	648	WP_007614107.1	YigZ family protein	-
ACHD8M_RS17730	-	3515955..3516986 (+)	1032	Protein_3429	LCP family protein	-
ACHD8M_RS17735	-	3517326..3519125 (-)	1800	WP_159354647.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1064369 ACHD8M_RS17720 WP_007407484.1 3513917..3515080(-) (degS) [Bacillus velezensis strain BRI3]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1064369 ACHD8M_RS17720 WP_007407484.1 3513917..3515080(-) (degS) [Bacillus velezensis strain BRI3]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGAAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCAGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGCCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGATAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951