Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACG3JI_RS09120 | Genome accession | NZ_CP171734 |
| Coordinates | 1793720..1794247 (+) | Length | 175 a.a. |
| NCBI ID | WP_013794415.1 | Uniprot ID | - |
| Organism | Streptococcus parauberis strain DB-M9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1788720..1799247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACG3JI_RS09075 (ACG3JI_09075) | - | 1789139..1789342 (+) | 204 | WP_003108729.1 | helix-turn-helix domain-containing protein | - |
| ACG3JI_RS09080 (ACG3JI_09080) | - | 1789379..1789561 (+) | 183 | WP_003108726.1 | hypothetical protein | - |
| ACG3JI_RS09085 (ACG3JI_09085) | - | 1789636..1789827 (+) | 192 | WP_003108723.1 | hypothetical protein | - |
| ACG3JI_RS09090 (ACG3JI_09090) | - | 1789824..1790777 (+) | 954 | WP_151191588.1 | phage replisome organizer N-terminal domain-containing protein | - |
| ACG3JI_RS09095 (ACG3JI_09095) | - | 1790779..1791057 (+) | 279 | WP_041828632.1 | hypothetical protein | - |
| ACG3JI_RS09100 (ACG3JI_09100) | - | 1791157..1791798 (+) | 642 | WP_394714061.1 | ERF family protein | - |
| ACG3JI_RS09105 (ACG3JI_09105) | - | 1791802..1792833 (+) | 1032 | WP_013794416.1 | DUF1351 domain-containing protein | - |
| ACG3JI_RS09110 (ACG3JI_09110) | - | 1792835..1793368 (+) | 534 | WP_041828630.1 | MazG-like family protein | - |
| ACG3JI_RS09115 (ACG3JI_09115) | - | 1793365..1793727 (+) | 363 | WP_080560929.1 | helix-turn-helix transcriptional regulator | - |
| ACG3JI_RS09120 (ACG3JI_09120) | ssbA | 1793720..1794247 (+) | 528 | WP_013794415.1 | single-stranded DNA-binding protein | Machinery gene |
| ACG3JI_RS09125 (ACG3JI_09125) | - | 1794262..1794750 (+) | 489 | WP_003108699.1 | helix-turn-helix domain-containing protein | - |
| ACG3JI_RS09130 (ACG3JI_09130) | - | 1794743..1794991 (+) | 249 | WP_041828629.1 | hypothetical protein | - |
| ACG3JI_RS09135 (ACG3JI_09135) | - | 1795334..1795660 (+) | 327 | WP_003108696.1 | DUF1372 family protein | - |
| ACG3JI_RS09140 (ACG3JI_09140) | - | 1795660..1795845 (+) | 186 | WP_041828628.1 | hypothetical protein | - |
| ACG3JI_RS09145 (ACG3JI_09145) | - | 1795848..1796021 (+) | 174 | WP_259966517.1 | hypothetical protein | - |
| ACG3JI_RS09150 (ACG3JI_09150) | - | 1796073..1796315 (+) | 243 | WP_041828626.1 | hypothetical protein | - |
| ACG3JI_RS09155 (ACG3JI_09155) | - | 1796305..1796850 (+) | 546 | WP_013794414.1 | DUF1642 domain-containing protein | - |
| ACG3JI_RS09160 (ACG3JI_09160) | - | 1796840..1797241 (+) | 402 | WP_041828624.1 | endodeoxyribonuclease RusA | - |
| ACG3JI_RS09165 (ACG3JI_09165) | - | 1797234..1797452 (+) | 219 | WP_041828623.1 | hypothetical protein | - |
| ACG3JI_RS09170 (ACG3JI_09170) | - | 1797449..1797706 (+) | 258 | WP_259966516.1 | hypothetical protein | - |
| ACG3JI_RS09175 (ACG3JI_09175) | - | 1797784..1797963 (+) | 180 | WP_041828620.1 | hypothetical protein | - |
| ACG3JI_RS09180 (ACG3JI_09180) | - | 1797950..1798336 (+) | 387 | WP_041828619.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19991.85 Da Isoelectric Point: 4.7079
>NTDB_id=1063900 ACG3JI_RS09120 WP_013794415.1 1793720..1794247(+) (ssbA) [Streptococcus parauberis strain DB-M9]
MINNVVLVGRLTKDAELRYTPSQVAVATFTLAVNRRIKEQNGEREADFINCVIWRDPAVNLEKWTNKGSLIGITGRINTR
NYENQQGQKVYVTEVIADNFQLLESRKDNNQGTPQNNQGYQQPQNNNQQPQNNYQQNNQGYQQTNNQGFNQGQQGSFFDG
MTTNPMDISDDDLPF
MINNVVLVGRLTKDAELRYTPSQVAVATFTLAVNRRIKEQNGEREADFINCVIWRDPAVNLEKWTNKGSLIGITGRINTR
NYENQQGQKVYVTEVIADNFQLLESRKDNNQGTPQNNQGYQQPQNNNQQPQNNYQQNNQGYQQTNNQGFNQGQQGSFFDG
MTTNPMDISDDDLPF
Nucleotide
Download Length: 528 bp
>NTDB_id=1063900 ACG3JI_RS09120 WP_013794415.1 1793720..1794247(+) (ssbA) [Streptococcus parauberis strain DB-M9]
ATGATTAATAATGTTGTTTTAGTTGGTCGATTGACCAAGGATGCAGAGTTGCGATATACACCAAGTCAGGTAGCAGTTGC
AACTTTCACATTGGCGGTTAATCGTCGAATTAAAGAGCAAAATGGTGAACGTGAGGCAGACTTTATCAATTGTGTCATTT
GGAGAGATCCTGCTGTCAATCTTGAAAAATGGACTAACAAAGGATCACTAATTGGTATCACAGGCAGAATTAATACTAGA
AATTATGAAAACCAACAAGGTCAGAAAGTCTATGTAACTGAGGTTATTGCTGACAATTTCCAGTTACTAGAAAGTCGCAA
GGATAATAACCAAGGGACACCTCAAAATAACCAAGGTTATCAACAGCCTCAGAATAATAACCAACAACCTCAAAATAATT
ATCAACAAAATAACCAAGGTTATCAACAAACAAACAATCAAGGGTTTAATCAAGGTCAGCAAGGAAGTTTCTTTGATGGC
ATGACTACAAATCCAATGGATATCAGTGATGACGATTTGCCATTCTAA
ATGATTAATAATGTTGTTTTAGTTGGTCGATTGACCAAGGATGCAGAGTTGCGATATACACCAAGTCAGGTAGCAGTTGC
AACTTTCACATTGGCGGTTAATCGTCGAATTAAAGAGCAAAATGGTGAACGTGAGGCAGACTTTATCAATTGTGTCATTT
GGAGAGATCCTGCTGTCAATCTTGAAAAATGGACTAACAAAGGATCACTAATTGGTATCACAGGCAGAATTAATACTAGA
AATTATGAAAACCAACAAGGTCAGAAAGTCTATGTAACTGAGGTTATTGCTGACAATTTCCAGTTACTAGAAAGTCGCAA
GGATAATAACCAAGGGACACCTCAAAATAACCAAGGTTATCAACAGCCTCAGAATAATAACCAACAACCTCAAAATAATT
ATCAACAAAATAACCAAGGTTATCAACAAACAAACAATCAAGGGTTTAATCAAGGTCAGCAAGGAAGTTTCTTTGATGGC
ATGACTACAAATCCAATGGATATCAGTGATGACGATTTGCCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.618 |
100 |
0.566 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.056 |
100 |
0.56 |