Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACG3JF_RS09705 Genome accession   NZ_CP171732
Coordinates   1890473..1891282 (+) Length   269 a.a.
NCBI ID   WP_037619792.1    Uniprot ID   A0AAE4L2Y1
Organism   Streptococcus parauberis strain DB-M3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1885473..1896282
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACG3JF_RS09680 (ACG3JF_09680) - 1885832..1886536 (-) 705 WP_003104614.1 amino acid ABC transporter permease -
  ACG3JF_RS09685 (ACG3JF_09685) - 1886550..1887365 (-) 816 WP_013793731.1 transporter substrate-binding domain-containing protein -
  ACG3JF_RS09690 (ACG3JF_09690) - 1887378..1888157 (-) 780 WP_003106355.1 amino acid ABC transporter ATP-binding protein -
  ACG3JF_RS09695 (ACG3JF_09695) vicR 1888405..1889115 (+) 711 WP_013793732.1 response regulator YycF Regulator
  ACG3JF_RS09700 (ACG3JF_09700) vicK 1889108..1890468 (+) 1361 Protein_1864 cell wall metabolism sensor histidine kinase VicK -
  ACG3JF_RS09705 (ACG3JF_09705) vicX 1890473..1891282 (+) 810 WP_037619792.1 MBL fold metallo-hydrolase Regulator
  ACG3JF_RS09710 (ACG3JF_09710) rnc 1891380..1892072 (+) 693 WP_003103277.1 ribonuclease III -
  ACG3JF_RS09715 (ACG3JF_09715) smc 1892073..1895617 (+) 3545 Protein_1867 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30296.19 Da        Isoelectric Point: 5.7226

>NTDB_id=1063802 ACG3JF_RS09705 WP_037619792.1 1890473..1891282(+) (vicX) [Streptococcus parauberis strain DB-M3]
MENFGFKYSILASGSTGNSFYLETPKQKILVDAGLTGKKMTSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHLD
IYANQNTWKIIDDRNMIGKIDSEHKHIFDRDKVMTFGDIDIESFGVSHDAHDPQFYRFMKDNKSFVMLTDTGYVSDRMSG
IIENADGYLIESNHDIEILRSGGYPWSLKQRILSDRGHLSNEDGAQAMIRSMGNATKKIYLGHLSKENNIKELAHMTMEN
QLAMADLAVGSDFKVYDTSPDTASPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1063802 ACG3JF_RS09705 WP_037619792.1 1890473..1891282(+) (vicX) [Streptococcus parauberis strain DB-M3]
ATGGAGAATTTTGGATTTAAATATAGTATATTAGCCTCTGGTTCAACAGGAAACAGTTTTTACTTGGAAACACCAAAGCA
AAAGATTTTGGTCGATGCAGGACTCACTGGTAAAAAAATGACAAGTCTCTTAGCTGAGATTGATCGGAAACCTGAAGATT
TAGATGCTATCTTGATTACACATGAACATTCTGACCATATTAAAGGTGTCGGGGTATTGGCTAGAAAATATCATTTAGAT
ATCTATGCTAATCAAAATACTTGGAAAATAATTGATGACCGCAATATGATTGGCAAAATTGATTCCGAACACAAACATAT
CTTTGATCGGGATAAAGTCATGACTTTTGGTGATATTGATATTGAAAGTTTTGGGGTTAGTCATGATGCCCATGATCCGC
AGTTTTATCGTTTTATGAAGGATAACAAATCCTTTGTCATGTTGACTGATACTGGTTACGTCTCGGATCGCATGTCGGGA
ATTATTGAAAATGCTGATGGTTACTTGATTGAATCAAATCATGACATCGAAATTTTAAGATCTGGTGGCTATCCTTGGAG
CTTAAAACAACGTATATTGTCTGATAGAGGGCATTTATCTAACGAAGATGGTGCACAAGCTATGATACGAAGTATGGGAA
ATGCTACTAAGAAGATTTATCTTGGACATTTGAGTAAAGAAAATAATATCAAAGAGTTGGCTCATATGACGATGGAAAAT
CAACTAGCTATGGCAGACTTAGCTGTCGGTTCTGATTTCAAAGTCTACGATACCTCCCCTGATACGGCTAGTCCTTTGAC
AGATATCTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758

Multiple sequence alignment