Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AABA07_RS01210 Genome accession   NZ_AP028608
Coordinates   229395..230654 (+) Length   419 a.a.
NCBI ID   WP_000900671.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain Sep3     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 224395..235654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA07_RS01180 (TKY120829_02330) - 224419..224881 (+) 463 Protein_228 GNAT family protein -
  AABA07_RS01185 (TKY120829_02340) - 224893..225308 (+) 416 Protein_229 GNAT family N-acetyltransferase -
  AABA07_RS01190 (TKY120829_02350) ruvB 226021..227019 (+) 999 WP_001809468.1 Holliday junction branch migration DNA helicase RuvB -
  AABA07_RS01195 (TKY120829_02360) - 227000..227572 (+) 573 WP_001098891.1 nucleotidyltransferase family protein -
  AABA07_RS01200 (TKY120829_02370) - 227803..228561 (+) 759 WP_000466727.1 isoprenyl transferase -
  AABA07_RS01205 (TKY120829_02380) - 228570..229373 (+) 804 WP_000189858.1 phosphatidate cytidylyltransferase -
  AABA07_RS01210 (TKY120829_02390) eeP 229395..230654 (+) 1260 WP_000900671.1 RIP metalloprotease RseP Regulator
  AABA07_RS01215 (TKY120829_02400) - 230667..232520 (+) 1854 WP_000814081.1 proline--tRNA ligase -
  AABA07_RS01220 (TKY120829_02410) bglA 232619..233998 (+) 1380 WP_000943515.1 6-phospho-beta-glucosidase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45893.60 Da        Isoelectric Point: 6.2578

>NTDB_id=106334 AABA07_RS01210 WP_000900671.1 229395..230654(+) (eeP) [Streptococcus pneumoniae strain Sep3]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLADNGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWVLIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVETETKDKTAPTLDVTISEKGSDKQVTVTPEDSQGRYLLGVQPGVKSDFLSMFVGGFTTATDSALRILSALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENILYFLAMISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=106334 AABA07_RS01210 WP_000900671.1 229395..230654(+) (eeP) [Streptococcus pneumoniae strain Sep3]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTCGGGATTATTGTAGTGGTGCACGAGTTCGGGCACTTCTACTTTGCCAA
GAAATCAGGGATTTTAGTACGTGAATTTGCCATCGGTATGGGACCTAAAATCTTTGCTCACATTGGCAAGGATGGAACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTCCGCATGGCCGGTTGGGGTGATGATACAACTGAAATCAAGACA
GGAACGCCTGTTAGTTTGACACTTGCTGATAATGGTAAGGTTAAACGCATCAATCTCTCAGGTAAAAAATTGGATCAAAC
AGCCCTCCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAAGGATTGGTTCTAGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGCAAACTGATTACCAATTTTGCAGGTCCTATGAACAATTTTATCTTAGGTGTCGTTGTTTT
TTGGGTTTTAATCTTTATGCAGGGTGGTGTCAGAGATGTTGATACCAATCAGTTCCATATCATGCCCCAAGGTGCCTTGG
CCAAGGTAGGAGTACCAGAAACGGCACAAATTACCAAGATTGGCTCACATGAGGTTAGCAACTGGGAAAGCTTGATCCAA
GCTGTGGAAACAGAAACCAAAGATAAGACGGCACCGACTTTGGATGTGACTATTTCTGAAAAGGGGAGTGACAAACAAGT
CACTGTTACACCCGAAGATAGTCAAGGTCGTTACCTTCTAGGTGTTCAACCGGGGGTTAAGTCAGATTTTCTATCCATGT
TTGTAGGTGGTTTTACAACTGCTACTGACTCAGCTCTCCGAATTCTCTCAGCTCTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAGTTGGGTGGACCTGTTGCTATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATATCTTGTA
CTTCTTGGCAATGATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCTTGGATGGTGGTAAGATTGTGC
TCAATATCCTAGAAGCCATCCGCCGCAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACTTGGAATGACATTATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.571

100

0.637

  eeP Streptococcus thermophilus LMG 18311

63.571

100

0.637


Multiple sequence alignment