Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACF0HZ_RS09470 | Genome accession | NZ_CP171619 |
| Coordinates | 1868005..1868571 (+) | Length | 188 a.a. |
| NCBI ID | WP_002815494.1 | Uniprot ID | A0A223XQS1 |
| Organism | Leuconostoc suionicum strain VITA-PB2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1863005..1873571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF0HZ_RS09450 (ACF0HZ_09465) | - | 1863478..1865154 (+) | 1677 | WP_072614365.1 | ABC transporter ATP-binding protein | - |
| ACF0HZ_RS09455 (ACF0HZ_09470) | - | 1865156..1865983 (+) | 828 | WP_282834941.1 | energy-coupling factor transporter transmembrane component T family protein | - |
| ACF0HZ_RS09460 (ACF0HZ_09475) | pepV | 1865980..1867416 (+) | 1437 | WP_394457168.1 | dipeptidase PepV | - |
| ACF0HZ_RS09465 (ACF0HZ_09480) | rpsF | 1867675..1867971 (+) | 297 | WP_011680503.1 | 30S ribosomal protein S6 | - |
| ACF0HZ_RS09470 (ACF0HZ_09485) | ssb | 1868005..1868571 (+) | 567 | WP_002815494.1 | single-stranded DNA-binding protein | Machinery gene |
| ACF0HZ_RS09475 (ACF0HZ_09490) | rpsR | 1868603..1868887 (+) | 285 | WP_004911134.1 | 30S ribosomal protein S18 | - |
| ACF0HZ_RS09480 (ACF0HZ_09495) | - | 1869058..1871085 (+) | 2028 | WP_072614363.1 | DHH family phosphoesterase | - |
| ACF0HZ_RS09485 (ACF0HZ_09500) | rplI | 1871103..1871555 (+) | 453 | WP_042251058.1 | 50S ribosomal protein L9 | - |
| ACF0HZ_RS09490 (ACF0HZ_09505) | dnaB | 1871557..1873020 (+) | 1464 | WP_072614362.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20159.69 Da Isoelectric Point: 4.5478
>NTDB_id=1062367 ACF0HZ_RS09470 WP_002815494.1 1868005..1868571(+) (ssb) [Leuconostoc suionicum strain VITA-PB2]
MINRVVLIGRLTRDVELRYTQSGVAVGTFSLAVNRQFTNASGEREADFINAVIWRKAAENFANFTGKGALVAVEGRLQTR
NYENNAGQRVYVTEVVVDNFSLLESRAESEKRRSQNGSSASNNGADNFSGSNDHSFGGNDNSFNGVDPFASASSNSNTQS
SASSNSAPNPFAASGNTEIDISDDDLPF
MINRVVLIGRLTRDVELRYTQSGVAVGTFSLAVNRQFTNASGEREADFINAVIWRKAAENFANFTGKGALVAVEGRLQTR
NYENNAGQRVYVTEVVVDNFSLLESRAESEKRRSQNGSSASNNGADNFSGSNDHSFGGNDNSFNGVDPFASASSNSNTQS
SASSNSAPNPFAASGNTEIDISDDDLPF
Nucleotide
Download Length: 567 bp
>NTDB_id=1062367 ACF0HZ_RS09470 WP_002815494.1 1868005..1868571(+) (ssb) [Leuconostoc suionicum strain VITA-PB2]
ATGATTAATCGAGTAGTATTAATTGGGCGATTGACCCGTGATGTTGAATTACGTTACACACAATCAGGTGTAGCAGTCGG
TACGTTTAGCTTGGCAGTTAACCGTCAGTTCACCAACGCAAGTGGTGAACGTGAGGCTGACTTTATTAACGCCGTTATTT
GGCGAAAAGCAGCTGAAAACTTTGCAAACTTCACTGGAAAAGGTGCACTTGTGGCTGTTGAAGGTCGTTTGCAAACAAGA
AATTATGAAAATAATGCTGGCCAACGCGTTTACGTGACGGAAGTTGTTGTTGATAATTTCTCATTACTCGAATCTCGCGC
TGAAAGTGAAAAGCGTCGTTCTCAGAACGGATCATCGGCATCTAATAATGGTGCTGACAACTTCAGCGGATCAAACGATC
ATTCGTTTGGCGGTAATGATAACTCATTTAACGGTGTTGATCCTTTTGCAAGTGCGAGCTCAAACTCAAATACGCAATCA
TCAGCTTCGTCAAATAGTGCCCCTAACCCATTTGCGGCTAGTGGCAATACAGAAATTGATATATCAGATGATGATTTACC
ATTCTAA
ATGATTAATCGAGTAGTATTAATTGGGCGATTGACCCGTGATGTTGAATTACGTTACACACAATCAGGTGTAGCAGTCGG
TACGTTTAGCTTGGCAGTTAACCGTCAGTTCACCAACGCAAGTGGTGAACGTGAGGCTGACTTTATTAACGCCGTTATTT
GGCGAAAAGCAGCTGAAAACTTTGCAAACTTCACTGGAAAAGGTGCACTTGTGGCTGTTGAAGGTCGTTTGCAAACAAGA
AATTATGAAAATAATGCTGGCCAACGCGTTTACGTGACGGAAGTTGTTGTTGATAATTTCTCATTACTCGAATCTCGCGC
TGAAAGTGAAAAGCGTCGTTCTCAGAACGGATCATCGGCATCTAATAATGGTGCTGACAACTTCAGCGGATCAAACGATC
ATTCGTTTGGCGGTAATGATAACTCATTTAACGGTGTTGATCCTTTTGCAAGTGCGAGCTCAAACTCAAATACGCAATCA
TCAGCTTCGTCAAATAGTGCCCCTAACCCATTTGCGGCTAGTGGCAATACAGAAATTGATATATCAGATGATGATTTACC
ATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
62.766 |
100 |
0.628 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
51.596 |
100 |
0.516 |