Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACF0HT_RS06670 | Genome accession | NZ_CP171612 |
| Coordinates | 1379689..1380663 (+) | Length | 324 a.a. |
| NCBI ID | WP_069794318.1 | Uniprot ID | - |
| Organism | Staphylococcus xylosus strain 14BME18 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1374689..1385663
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF0HT_RS06635 (ACF0HT_06635) | rpmG | 1374797..1374946 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| ACF0HT_RS06640 (ACF0HT_06640) | - | 1375077..1375619 (+) | 543 | WP_069794316.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACF0HT_RS06645 (ACF0HT_06645) | - | 1375631..1377088 (+) | 1458 | WP_069794317.1 | rhomboid family intramembrane serine protease | - |
| ACF0HT_RS06650 (ACF0HT_06650) | - | 1377072..1377266 (+) | 195 | WP_042363548.1 | YqgQ family protein | - |
| ACF0HT_RS06655 (ACF0HT_06655) | - | 1377656..1378642 (+) | 987 | WP_029377187.1 | glucokinase | - |
| ACF0HT_RS06660 (ACF0HT_06660) | - | 1378642..1378965 (+) | 324 | WP_042362616.1 | MTH1187 family thiamine-binding protein | - |
| ACF0HT_RS06665 (ACF0HT_06665) | - | 1378967..1379590 (+) | 624 | WP_042362617.1 | MBL fold metallo-hydrolase | - |
| ACF0HT_RS06670 (ACF0HT_06670) | comGA | 1379689..1380663 (+) | 975 | WP_069794318.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACF0HT_RS06675 (ACF0HT_06675) | comGB | 1380635..1381702 (+) | 1068 | WP_069794319.1 | competence type IV pilus assembly protein ComGB | - |
| ACF0HT_RS06680 (ACF0HT_06680) | comGC | 1381722..1382039 (+) | 318 | WP_029377192.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACF0HT_RS06685 (ACF0HT_06685) | comGD | 1382020..1382463 (+) | 444 | WP_225523058.1 | competence type IV pilus minor pilin ComGD | - |
| ACF0HT_RS06690 (ACF0HT_06690) | - | 1382450..1382749 (+) | 300 | WP_069794320.1 | hypothetical protein | - |
| ACF0HT_RS06695 (ACF0HT_06695) | comGF | 1382721..1383164 (+) | 444 | WP_069794321.1 | competence type IV pilus minor pilin ComGF | - |
| ACF0HT_RS06700 (ACF0HT_06700) | - | 1383323..1383844 (+) | 522 | WP_394523293.1 | shikimate kinase | - |
| ACF0HT_RS06705 (ACF0HT_06705) | gcvT | 1384032..1385123 (+) | 1092 | WP_042362624.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37202.42 Da Isoelectric Point: 9.3721
>NTDB_id=1062340 ACF0HT_RS06670 WP_069794318.1 1379689..1380663(+) (comGA) [Staphylococcus xylosus strain 14BME18]
MKLLFNSMIEKAINNDASDIHFIPADKEVMIKFRIRDDLKSIETLQLNTYLKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGHESCVIRIIPQYFQKHKNNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKENLNLN
IITIEEPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSITSILNQRLITNIKGERELVYEQITKEDIYHFFKNSYTLPKDFHNLSYKLNKMSKEGMICETSM
ERYL
MKLLFNSMIEKAINNDASDIHFIPADKEVMIKFRIRDDLKSIETLQLNTYLKLLTYMKYQAGLDVSKHNAAQSGRYIYKL
KQIYFLRISTLPLSLGHESCVIRIIPQYFQKHKNNQNITHLYNLMNKKQGLILLSGPTGSGKSTLMYHMLSYAKENLNLN
IITIEEPVEQLINGITQISLNEKAGINYETSFKAILRCDPDIILIGEIRDANVAKHVIQASLSGHLVLSTIHASNCKGVI
LRLLEMGITVQQLIQSITSILNQRLITNIKGERELVYEQITKEDIYHFFKNSYTLPKDFHNLSYKLNKMSKEGMICETSM
ERYL
Nucleotide
Download Length: 975 bp
>NTDB_id=1062340 ACF0HT_RS06670 WP_069794318.1 1379689..1380663(+) (comGA) [Staphylococcus xylosus strain 14BME18]
TTGAAGCTATTGTTTAATAGTATGATTGAAAAGGCAATTAATAATGATGCATCAGATATTCATTTTATCCCCGCAGATAA
AGAAGTAATGATTAAATTTAGAATACGTGATGATTTGAAGTCTATAGAAACATTGCAATTAAATACGTATTTAAAATTAT
TAACCTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACACAATGCTGCACAGAGTGGTAGATATATTTATAAATTA
AAACAAATTTACTTCCTTAGAATATCAACGCTTCCTTTATCTCTAGGACATGAAAGCTGTGTTATTAGGATTATTCCGCA
ATATTTTCAAAAGCATAAAAATAATCAGAACATAACGCATTTATATAATCTAATGAATAAAAAACAAGGATTAATTTTAT
TGAGTGGACCTACTGGCTCTGGAAAAAGTACGTTAATGTATCACATGTTATCTTATGCTAAAGAGAACTTAAATTTAAAT
ATAATTACAATTGAAGAGCCCGTTGAACAATTAATAAATGGCATAACTCAAATATCATTAAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCTATTTTACGCTGCGATCCTGATATTATCTTGATTGGAGAAATAAGAGATGCAAACGTAG
CTAAACATGTTATACAAGCCAGTTTAAGTGGTCATTTAGTACTTTCGACAATTCATGCTAGTAATTGCAAAGGAGTTATC
TTAAGACTGCTAGAAATGGGGATAACGGTTCAACAACTCATACAATCAATTACTAGCATATTAAATCAAAGGCTTATTAC
TAACATAAAAGGTGAAAGAGAGCTTGTATATGAACAGATAACTAAAGAAGATATTTATCACTTCTTTAAAAATAGCTATA
CATTACCCAAAGATTTTCATAACTTATCTTATAAACTAAATAAAATGTCAAAAGAGGGGATGATATGTGAAACATCAATG
GAACGTTATCTCTAA
TTGAAGCTATTGTTTAATAGTATGATTGAAAAGGCAATTAATAATGATGCATCAGATATTCATTTTATCCCCGCAGATAA
AGAAGTAATGATTAAATTTAGAATACGTGATGATTTGAAGTCTATAGAAACATTGCAATTAAATACGTATTTAAAATTAT
TAACCTATATGAAATACCAAGCTGGATTAGATGTCTCTAAACACAATGCTGCACAGAGTGGTAGATATATTTATAAATTA
AAACAAATTTACTTCCTTAGAATATCAACGCTTCCTTTATCTCTAGGACATGAAAGCTGTGTTATTAGGATTATTCCGCA
ATATTTTCAAAAGCATAAAAATAATCAGAACATAACGCATTTATATAATCTAATGAATAAAAAACAAGGATTAATTTTAT
TGAGTGGACCTACTGGCTCTGGAAAAAGTACGTTAATGTATCACATGTTATCTTATGCTAAAGAGAACTTAAATTTAAAT
ATAATTACAATTGAAGAGCCCGTTGAACAATTAATAAATGGCATAACTCAAATATCATTAAATGAAAAGGCAGGGATAAA
TTATGAAACTTCTTTTAAAGCTATTTTACGCTGCGATCCTGATATTATCTTGATTGGAGAAATAAGAGATGCAAACGTAG
CTAAACATGTTATACAAGCCAGTTTAAGTGGTCATTTAGTACTTTCGACAATTCATGCTAGTAATTGCAAAGGAGTTATC
TTAAGACTGCTAGAAATGGGGATAACGGTTCAACAACTCATACAATCAATTACTAGCATATTAAATCAAAGGCTTATTAC
TAACATAAAAGGTGAAAGAGAGCTTGTATATGAACAGATAACTAAAGAAGATATTTATCACTTCTTTAAAAATAGCTATA
CATTACCCAAAGATTTTCATAACTTATCTTATAAACTAAATAAAATGTCAAAAGAGGGGATGATATGTGAAACATCAATG
GAACGTTATCTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.963 |
100 |
0.63 |
| comGA | Staphylococcus aureus N315 |
62.963 |
100 |
0.63 |