Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACF0HT_RS04380 | Genome accession | NZ_CP171612 |
| Coordinates | 931916..932335 (+) | Length | 139 a.a. |
| NCBI ID | WP_042362323.1 | Uniprot ID | - |
| Organism | Staphylococcus xylosus strain 14BME18 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 926916..937335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF0HT_RS04350 (ACF0HT_04350) | atpD | 926955..928367 (+) | 1413 | WP_042362320.1 | F0F1 ATP synthase subunit beta | - |
| ACF0HT_RS04355 (ACF0HT_04355) | - | 928387..928791 (+) | 405 | WP_017722095.1 | F0F1 ATP synthase subunit epsilon | - |
| ACF0HT_RS04360 (ACF0HT_04360) | - | 929134..929367 (+) | 234 | WP_042362321.1 | DUF1146 family protein | - |
| ACF0HT_RS04365 (ACF0HT_04365) | murA | 929474..930739 (+) | 1266 | WP_042362322.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACF0HT_RS04370 (ACF0HT_04370) | fabZ | 930797..931234 (+) | 438 | WP_029377977.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACF0HT_RS04375 (ACF0HT_04375) | - | 931285..931725 (-) | 441 | WP_017722099.1 | YwpF-like family protein | - |
| ACF0HT_RS04380 (ACF0HT_04380) | ssb | 931916..932335 (+) | 420 | WP_042362323.1 | single-stranded DNA-binding protein | Machinery gene |
| ACF0HT_RS04385 (ACF0HT_04385) | - | 932762..933457 (+) | 696 | WP_042362324.1 | transglycosylase family protein | - |
| ACF0HT_RS04390 (ACF0HT_04390) | tenA | 933897..934577 (+) | 681 | WP_042362325.1 | thiaminase II | - |
| ACF0HT_RS04395 (ACF0HT_04395) | thiD | 934579..935400 (+) | 822 | WP_047172091.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACF0HT_RS04400 (ACF0HT_04400) | thiM | 935393..936181 (+) | 789 | WP_069793844.1 | hydroxyethylthiazole kinase | - |
| ACF0HT_RS04405 (ACF0HT_04405) | thiE | 936184..936822 (+) | 639 | WP_047172093.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 16190.60 Da Isoelectric Point: 6.4617
>NTDB_id=1062328 ACF0HT_RS04380 WP_042362323.1 931916..932335(+) (ssb) [Staphylococcus xylosus strain 14BME18]
MINNIVIVGRLTKDPKIYEKEGNKLATMCVAITRNYKDKDQNTICDYLYCKAVGKIANNIELYLNKGSLVGITGQMQSRK
YEKEGQMHFVSELFIETIRFMSPRNKDEVNEFHEIFPIEQVCNSNKEKNLQDNEIYEIV
MINNIVIVGRLTKDPKIYEKEGNKLATMCVAITRNYKDKDQNTICDYLYCKAVGKIANNIELYLNKGSLVGITGQMQSRK
YEKEGQMHFVSELFIETIRFMSPRNKDEVNEFHEIFPIEQVCNSNKEKNLQDNEIYEIV
Nucleotide
Download Length: 420 bp
>NTDB_id=1062328 ACF0HT_RS04380 WP_042362323.1 931916..932335(+) (ssb) [Staphylococcus xylosus strain 14BME18]
ATGATTAACAACATTGTCATAGTAGGGAGATTAACAAAAGACCCTAAAATTTATGAAAAGGAGGGGAATAAATTAGCTAC
AATGTGTGTAGCGATAACAAGAAATTATAAAGATAAGGATCAAAATACTATTTGTGATTATCTCTATTGTAAGGCAGTTG
GTAAAATAGCTAATAATATCGAACTATATTTAAATAAAGGATCACTTGTGGGCATCACTGGACAAATGCAATCACGAAAA
TATGAAAAAGAAGGGCAGATGCATTTTGTATCGGAACTTTTTATTGAAACGATTAGATTTATGTCTCCGAGAAACAAAGA
TGAAGTTAACGAATTTCATGAAATATTCCCTATAGAGCAAGTTTGTAATTCTAATAAAGAAAAAAATTTACAAGATAATG
AAATATATGAAATTGTATAA
ATGATTAACAACATTGTCATAGTAGGGAGATTAACAAAAGACCCTAAAATTTATGAAAAGGAGGGGAATAAATTAGCTAC
AATGTGTGTAGCGATAACAAGAAATTATAAAGATAAGGATCAAAATACTATTTGTGATTATCTCTATTGTAAGGCAGTTG
GTAAAATAGCTAATAATATCGAACTATATTTAAATAAAGGATCACTTGTGGGCATCACTGGACAAATGCAATCACGAAAA
TATGAAAAAGAAGGGCAGATGCATTTTGTATCGGAACTTTTTATTGAAACGATTAGATTTATGTCTCCGAGAAACAAAGA
TGAAGTTAACGAATTTCATGAAATATTCCCTATAGAGCAAGTTTGTAATTCTAATAAAGAAAAAAATTTACAAGATAATG
AAATATATGAAATTGTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
65.421 |
76.978 |
0.504 |
| ssb | Staphylococcus aureus MW2 |
64.486 |
76.978 |
0.496 |