Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   AAA996_RS09235 Genome accession   NZ_AP028606
Coordinates   1799178..1799798 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain Sep1     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1794178..1804798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAA996_RS09210 (TKY121773_18050) recA 1794556..1795722 (-) 1167 WP_001085462.1 recombinase RecA Machinery gene
  AAA996_RS09215 (TKY121773_18060) cinA 1795777..1797033 (-) 1257 WP_000642707.1 competence/damage-inducible protein A Machinery gene
  AAA996_RS09220 (TKY121773_18070) - 1797117..1798133 (-) 1017 WP_000239282.1 LCP family protein -
  AAA996_RS09225 (TKY121773_18080) - 1798141..1798659 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  AAA996_RS09230 (TKY121773_18090) tsaE 1798649..1799092 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  AAA996_RS09235 (TKY121773_18100) comM 1799178..1799798 (-) 621 WP_000839908.1 hypothetical protein Regulator
  AAA996_RS09240 (TKY121773_18120) - 1800180..1801043 (-) 864 WP_001093643.1 helix-turn-helix transcriptional regulator -
  AAA996_RS09245 - 1801229..1801398 (+) 170 Protein_1809 PhrA family quorum-sensing system peptide -
  AAA996_RS09250 (TKY121773_18130) - 1801845..1803860 (+) 2016 WP_000732391.1 DUF1430 domain-containing protein -
  AAA996_RS09255 (TKY121773_18140) - 1803862..1804494 (+) 633 WP_000571418.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=106223 AAA996_RS09235 WP_000839908.1 1799178..1799798(-) (comM) [Streptococcus pneumoniae strain Sep1]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=106223 AAA996_RS09235 WP_000839908.1 1799178..1799798(-) (comM) [Streptococcus pneumoniae strain Sep1]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment