Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACGB44_RS20040 Genome accession   NZ_CP171478
Coordinates   4280299..4280706 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas frequens strain RL-XB02     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4275299..4285706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGB44_RS20020 (ACGB44_20020) - 4276259..4277125 (-) 867 WP_156244993.1 protein-glutamate O-methyltransferase CheR -
  ACGB44_RS20025 (ACGB44_20025) - 4277187..4279235 (-) 2049 WP_063540694.1 methyl-accepting chemotaxis protein -
  ACGB44_RS20030 (ACGB44_20030) - 4279312..4279848 (-) 537 WP_017245424.1 chemotaxis protein CheW -
  ACGB44_RS20035 (ACGB44_20035) pilH 4279890..4280255 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  ACGB44_RS20040 (ACGB44_20040) pilG 4280299..4280706 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  ACGB44_RS20045 (ACGB44_20045) gshB 4280942..4281892 (+) 951 WP_017245425.1 glutathione synthase -
  ACGB44_RS20050 (ACGB44_20050) - 4281980..4282873 (+) 894 WP_017245426.1 energy transducer TonB -
  ACGB44_RS20055 (ACGB44_20055) - 4283018..4283587 (+) 570 WP_017245427.1 YqgE/AlgH family protein -
  ACGB44_RS20060 (ACGB44_20060) ruvX 4283584..4284012 (+) 429 WP_017245428.1 Holliday junction resolvase RuvX -
  ACGB44_RS20065 (ACGB44_20065) pyrR 4284034..4284549 (+) 516 WP_110778831.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACGB44_RS20070 (ACGB44_20070) - 4284608..4285624 (+) 1017 WP_063540691.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=1061407 ACGB44_RS20040 WP_003282729.1 4280299..4280706(-) (pilG) [Stutzerimonas frequens strain RL-XB02]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1061407 ACGB44_RS20040 WP_003282729.1 4280299..4280706(-) (pilG) [Stutzerimonas frequens strain RL-XB02]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAGGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGATGGCTATCAGACCTGTGCACTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGATCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCAATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment