Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ACGIGR_RS06935 | Genome accession | NZ_CP171394 |
| Coordinates | 1463815..1464195 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain T3 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1458815..1469195
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGIGR_RS06905 (ACGIGR_06905) | kdsB | 1459718..1460479 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACGIGR_RS06910 (ACGIGR_06910) | - | 1460491..1461471 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ACGIGR_RS06915 (ACGIGR_06915) | - | 1461483..1461824 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ACGIGR_RS06920 (ACGIGR_06920) | - | 1461842..1462615 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ACGIGR_RS06925 (ACGIGR_06925) | - | 1462653..1463261 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ACGIGR_RS06930 (ACGIGR_06930) | - | 1463271..1463825 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ACGIGR_RS06935 (ACGIGR_06935) | xcpV | 1463815..1464195 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ACGIGR_RS06940 (ACGIGR_06940) | xcpW | 1464195..1464896 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ACGIGR_RS06945 (ACGIGR_06945) | gspK | 1464896..1465855 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ACGIGR_RS06950 (ACGIGR_06950) | - | 1466086..1466682 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ACGIGR_RS06955 (ACGIGR_06955) | ung | 1466733..1467446 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ACGIGR_RS06960 (ACGIGR_06960) | - | 1467443..1468567 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ACGIGR_RS06965 (ACGIGR_06965) | tadA | 1468574..1469077 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1061050 ACGIGR_RS06935 WP_000836911.1 1463815..1464195(+) (xcpV) [Acinetobacter baumannii strain T3]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1061050 ACGIGR_RS06935 WP_000836911.1 1463815..1464195(+) (xcpV) [Acinetobacter baumannii strain T3]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |