Detailed information NTG1061051

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ACGIGR_RS06940
• Genome accession: NZ_CP171394
• Coordinates: 1464195..1464896 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain T3
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1459195..1469896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACGIGR_RS06905 (ACGIGR_06905)	kdsB	1459718..1460479 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACGIGR_RS06910 (ACGIGR_06910)	-	1460491..1461471 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ACGIGR_RS06915 (ACGIGR_06915)	-	1461483..1461824 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
ACGIGR_RS06920 (ACGIGR_06920)	-	1461842..1462615 (+)	774	WP_000497298.1	TatD family hydrolase	-
ACGIGR_RS06925 (ACGIGR_06925)	-	1462653..1463261 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ACGIGR_RS06930 (ACGIGR_06930)	-	1463271..1463825 (+)	555	WP_000841373.1	type II secretion system protein	-
ACGIGR_RS06935 (ACGIGR_06935)	xcpV	1463815..1464195 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ACGIGR_RS06940 (ACGIGR_06940)	xcpW	1464195..1464896 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ACGIGR_RS06945 (ACGIGR_06945)	gspK	1464896..1465855 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ACGIGR_RS06950 (ACGIGR_06950)	-	1466086..1466682 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ACGIGR_RS06955 (ACGIGR_06955)	ung	1466733..1467446 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ACGIGR_RS06960 (ACGIGR_06960)	-	1467443..1468567 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ACGIGR_RS06965 (ACGIGR_06965)	tadA	1468574..1469077 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ACGIGR_RS06970 (ACGIGR_06970)	-	1469147..1469590 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=1061051 ACGIGR_RS06940 WP_000594589.1 1464195..1464896(+) (xcpW) [Acinetobacter baumannii strain T3]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=1061051 ACGIGR_RS06940 WP_000594589.1 1464195..1464896(+) (xcpW) [Acinetobacter baumannii strain T3]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996