Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | ACGK9W_RS21275 | Genome accession | NZ_CP171359 |
| Coordinates | 4559796..4561187 (-) | Length | 463 a.a. |
| NCBI ID | WP_008170709.1 | Uniprot ID | G6YPT5 |
| Organism | Marinobacter flavimaris strain ZYH30 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4554796..4566187
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACGK9W_RS21255 (ACGK9W_21255) | - | 4554962..4558318 (+) | 3357 | WP_008170716.1 | pilus assembly protein | - |
| ACGK9W_RS21260 (ACGK9W_21260) | - | 4558360..4558686 (+) | 327 | WP_139043660.1 | hypothetical protein | - |
| ACGK9W_RS21265 (ACGK9W_21265) | - | 4558683..4559138 (+) | 456 | WP_008170711.1 | type IV pilin protein | - |
| ACGK9W_RS21270 (ACGK9W_21270) | - | 4559140..4559700 (-) | 561 | WP_081467505.1 | GspH/FimT family pseudopilin | - |
| ACGK9W_RS21275 (ACGK9W_21275) | pilR | 4559796..4561187 (-) | 1392 | WP_008170709.1 | sigma-54 dependent transcriptional regulator | Regulator |
| ACGK9W_RS21280 (ACGK9W_21280) | - | 4561244..4562899 (-) | 1656 | WP_008170707.1 | PAS domain-containing sensor histidine kinase | - |
| ACGK9W_RS21285 (ACGK9W_21285) | - | 4562993..4564663 (+) | 1671 | WP_008170705.1 | NAD+ synthase | - |
| ACGK9W_RS21290 (ACGK9W_21290) | - | 4564724..4565557 (-) | 834 | WP_008170703.1 | outer membrane protein assembly factor BamD | - |
Sequence
Protein
Download Length: 463 a.a. Molecular weight: 50784.88 Da Isoelectric Point: 4.8548
>NTDB_id=1060881 ACGK9W_RS21275 WP_008170709.1 4559796..4561187(-) (pilR) [Marinobacter flavimaris strain ZYH30]
MTTYTALIVDDEPDIRELLEITLTRMGISTLTAPDLTSARKLLEQNATHLCLTDMNLPDGNGIELVQWIQKHSPATPVAL
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPKADAEDTADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELAVPPLRERPDDISLLS
NHILERIAKEYECDPASLTPAAVDRLRGYDFPGNVRELENVLERAFTLCDADQIDADDLHLGNGVQHAASASQIIAEGQA
NGEDGIAAVPDGEIDLEGYLEGIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
MTTYTALIVDDEPDIRELLEITLTRMGISTLTAPDLTSARKLLEQNATHLCLTDMNLPDGNGIELVQWIQKHSPATPVAL
ITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALKLSEPKADAEDTADEPGLLLGKSPEIRKLRNQTRKLARSQA
PVFISGESGSGKELVARMIHLQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKDGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRINVIELAVPPLRERPDDISLLS
NHILERIAKEYECDPASLTPAAVDRLRGYDFPGNVRELENVLERAFTLCDADQIDADDLHLGNGVQHAASASQIIAEGQA
NGEDGIAAVPDGEIDLEGYLEGIERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
Nucleotide
Download Length: 1392 bp
>NTDB_id=1060881 ACGK9W_RS21275 WP_008170709.1 4559796..4561187(-) (pilR) [Marinobacter flavimaris strain ZYH30]
ATGACCACATACACAGCGCTGATTGTTGATGATGAACCGGACATCCGGGAGTTACTCGAGATCACCCTCACCCGGATGGG
AATATCAACCCTCACGGCACCCGACCTCACCAGCGCCCGGAAATTGCTGGAACAGAACGCCACCCACCTCTGCCTGACCG
ACATGAACCTGCCAGACGGTAATGGCATTGAACTGGTCCAGTGGATTCAGAAACACTCTCCGGCCACGCCTGTTGCCTTG
ATCACAGCGTACGGCAACATGGACACCGCGATTGAATCGCTCAAAGCCGGGGCTTTTGATTTCGTGTCCAAACCGGTGGA
GCTGCCCCGACTAAGGGAACTGGTCAATAGCGCCCTCAAGCTATCTGAGCCCAAGGCAGACGCGGAAGATACAGCCGACG
AGCCAGGCCTGCTACTCGGCAAATCACCAGAGATTCGAAAACTCCGGAACCAGACCCGAAAACTGGCCCGAAGCCAGGCC
CCCGTGTTTATCAGTGGCGAATCTGGCAGTGGTAAAGAGCTGGTGGCCCGAATGATCCACCTCCAGGGACCCCGCCGCGA
AGGACCGTTCATCGCGGTTAACTGCGGTGCGATTCCCTCGGAACTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCA
GCTTTACCGGGGCCGTGGAGAACAAAGACGGCCTGTTCCGCTCTGCCAACGGAGGTACCCTATTCCTTGATGAAGTGGCA
GACCTGCCCCTGGCCATGCAGGTGAAACTGCTCCGCGCCATACAGGAAAAAGCCGTTCGGCCCGTCGGGGACACCAAGGA
AGTGCCCGTCGACATTCGGGTACTGAGCGCCACCCACAAGAATCTGCCGGAGCTGGTCCAGGAAGGCAGCTTTCGTCAGG
ATCTTTTCTACCGGATTAACGTGATCGAACTCGCAGTACCACCCCTGAGAGAGCGGCCGGATGATATTTCTCTGCTTTCG
AATCACATTCTTGAACGGATTGCGAAAGAGTATGAGTGTGACCCTGCCTCGTTAACGCCAGCGGCCGTGGACAGACTGCG
AGGCTATGACTTTCCGGGCAATGTCCGGGAACTGGAAAACGTCTTGGAGCGGGCTTTTACCCTGTGCGACGCCGATCAGA
TCGATGCTGATGATCTGCATCTGGGGAATGGTGTTCAGCATGCAGCTTCGGCCTCGCAGATCATTGCTGAAGGGCAAGCA
AACGGGGAAGATGGCATTGCAGCAGTACCCGATGGTGAAATCGATCTCGAAGGATATCTGGAAGGCATCGAGCGGCAAGC
CATTGAGAAGGCGCTTGAGGCAACTCGGTGGAACAAGACGGCGGCAGCGAAACGATTGGGGATTAGCTTTCGAGCATTGC
GGTATAGGTTGAAGAAGTTGGGAATGGAATAA
ATGACCACATACACAGCGCTGATTGTTGATGATGAACCGGACATCCGGGAGTTACTCGAGATCACCCTCACCCGGATGGG
AATATCAACCCTCACGGCACCCGACCTCACCAGCGCCCGGAAATTGCTGGAACAGAACGCCACCCACCTCTGCCTGACCG
ACATGAACCTGCCAGACGGTAATGGCATTGAACTGGTCCAGTGGATTCAGAAACACTCTCCGGCCACGCCTGTTGCCTTG
ATCACAGCGTACGGCAACATGGACACCGCGATTGAATCGCTCAAAGCCGGGGCTTTTGATTTCGTGTCCAAACCGGTGGA
GCTGCCCCGACTAAGGGAACTGGTCAATAGCGCCCTCAAGCTATCTGAGCCCAAGGCAGACGCGGAAGATACAGCCGACG
AGCCAGGCCTGCTACTCGGCAAATCACCAGAGATTCGAAAACTCCGGAACCAGACCCGAAAACTGGCCCGAAGCCAGGCC
CCCGTGTTTATCAGTGGCGAATCTGGCAGTGGTAAAGAGCTGGTGGCCCGAATGATCCACCTCCAGGGACCCCGCCGCGA
AGGACCGTTCATCGCGGTTAACTGCGGTGCGATTCCCTCGGAACTGATGGAAAGCGAATTCTTCGGCCACAAGAAAGGCA
GCTTTACCGGGGCCGTGGAGAACAAAGACGGCCTGTTCCGCTCTGCCAACGGAGGTACCCTATTCCTTGATGAAGTGGCA
GACCTGCCCCTGGCCATGCAGGTGAAACTGCTCCGCGCCATACAGGAAAAAGCCGTTCGGCCCGTCGGGGACACCAAGGA
AGTGCCCGTCGACATTCGGGTACTGAGCGCCACCCACAAGAATCTGCCGGAGCTGGTCCAGGAAGGCAGCTTTCGTCAGG
ATCTTTTCTACCGGATTAACGTGATCGAACTCGCAGTACCACCCCTGAGAGAGCGGCCGGATGATATTTCTCTGCTTTCG
AATCACATTCTTGAACGGATTGCGAAAGAGTATGAGTGTGACCCTGCCTCGTTAACGCCAGCGGCCGTGGACAGACTGCG
AGGCTATGACTTTCCGGGCAATGTCCGGGAACTGGAAAACGTCTTGGAGCGGGCTTTTACCCTGTGCGACGCCGATCAGA
TCGATGCTGATGATCTGCATCTGGGGAATGGTGTTCAGCATGCAGCTTCGGCCTCGCAGATCATTGCTGAAGGGCAAGCA
AACGGGGAAGATGGCATTGCAGCAGTACCCGATGGTGAAATCGATCTCGAAGGATATCTGGAAGGCATCGAGCGGCAAGC
CATTGAGAAGGCGCTTGAGGCAACTCGGTGGAACAAGACGGCGGCAGCGAAACGATTGGGGATTAGCTTTCGAGCATTGC
GGTATAGGTTGAAGAAGTTGGGAATGGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
63.793 |
100 |
0.639 |
| pilR | Acinetobacter baumannii strain A118 |
53.247 |
99.784 |
0.531 |