Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   ACF0HW_RS03750 Genome accession   NZ_CP171208
Coordinates   730825..733125 (+) Length   766 a.a.
NCBI ID   WP_012118313.1    Uniprot ID   A3KLB7
Organism   Bacillus amyloliquefaciens strain HN11     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 725825..738125
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF0HW_RS03720 - 725829..727295 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  ACF0HW_RS03725 - 727425..728648 (+) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  ACF0HW_RS03730 - 728655..728996 (-) 342 WP_012118316.1 hypothetical protein -
  ACF0HW_RS03735 degQ 729461..729601 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACF0HW_RS03740 - 729809..730669 (+) 861 WP_012118315.1 polyprenyl synthetase family protein -
  ACF0HW_RS03745 comX 730638..730811 (+) 174 WP_012118314.1 competence pheromone ComX -
  ACF0HW_RS03750 comP 730825..733125 (+) 2301 WP_012118313.1 histidine kinase Regulator
  ACF0HW_RS03755 comA 733206..733850 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  ACF0HW_RS03760 - 733872..734255 (+) 384 WP_012118312.1 hotdog fold thioesterase -
  ACF0HW_RS03765 mnhG 734295..734669 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ACF0HW_RS03770 - 734653..734937 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  ACF0HW_RS03775 - 734937..735413 (-) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  ACF0HW_RS03780 - 735419..736900 (-) 1482 WP_041482212.1 Na+/H+ antiporter subunit D -
  ACF0HW_RS03785 - 736893..737234 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ACF0HW_RS03790 - 737234..737665 (-) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 766 a.a.        Molecular weight: 88341.60 Da        Isoelectric Point: 7.2116

>NTDB_id=1060459 ACF0HW_RS03750 WP_012118313.1 730825..733125(+) (comP) [Bacillus amyloliquefaciens strain HN11]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITVGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNVRYFFNDNEKKLWELYSHQLAETTSEIGKIVQV
DKGFLMKIGERGTKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=1060459 ACF0HW_RS03750 WP_012118313.1 730825..733125(+) (comP) [Bacillus amyloliquefaciens strain HN11]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTATTTGTAGGAGCCACCGCAAATGTTAATAATAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCATATTATGCTGGTGTTAAAAAAGGTGACATTGTAATTAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTAAGGTCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTGAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTGATAGCTTTATTTTTCATTACTGTAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTTTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGACAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAGCAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAGGTAGAAGGAGACTTAAATGTAAGGTATTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCTGTATTCTCATCAATTAGCTGAAACGACAAGTGAAATTGGCAAGATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCACTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTAAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGCCTG
GTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(566-635)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.471

99.869

0.564

Multiple sequence alignment