Detailed information NTG1060389

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACFN7Z_RS16320
• Genome accession: NZ_CP171157
• Coordinates: 3319430..3320794 (+)
• Length: 454 a.a.
• NCBI ID: WP_395442680.1
• Uniprot ID: -
• Organism: Acinetobacter sp. P1332
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3314430..3325794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFN7Z_RS16300 (ACFN7Z_16300)	thrC	3314636..3315775 (+)	1140	WP_010325699.1	threonine synthase	-
ACFN7Z_RS16305 (ACFN7Z_16305)	-	3315861..3316916 (-)	1056	WP_010325698.1	serine hydrolase	-
ACFN7Z_RS16310 (ACFN7Z_16310)	-	3317132..3317767 (+)	636	WP_010325697.1	response regulator	-
ACFN7Z_RS16315 (ACFN7Z_16315)	pilS	3317789..3319357 (+)	1569	WP_010325696.1	PAS domain-containing sensor histidine kinase	Regulator
ACFN7Z_RS16320 (ACFN7Z_16320)	pilR	3319430..3320794 (+)	1365	WP_395442680.1	sigma-54-dependent transcriptional regulator	Regulator
ACFN7Z_RS16325 (ACFN7Z_16325)	-	3320799..3321974 (-)	1176	WP_010325694.1	S41 family peptidase	-
ACFN7Z_RS16330 (ACFN7Z_16330)	gpmI	3321993..3323540 (-)	1548	WP_010325693.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACFN7Z_RS16335 (ACFN7Z_16335)	lptG	3323664..3324734 (-)	1071	WP_010325692.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 51103.83 Da
• Isoelectric Point: 7.0113

>NTDB_id=1060389 ACFN7Z_RS16320 WP_395442680.1 3319430..3320794(+) (pilR) [Acinetobacter sp. P1332]
MQMSLSRMGIDTRIAYRLQEAVQALKTHQYDACLTDLNLPDGNGLTLVDFIAQNYPNLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPINQKHLEQLLQKAFNQPISHLHIQEDTLEHRLLIGQSLPIQQLRITLKKIARSQAPVFITGESGTGKEVVANL
VHRLSNRNEGPFIAINCGAIPTELMESELFGHRKGSFTGATQDKQGLILSAHGGSLFLDEIAELPLTMQVKLLRAVQEKR
IRPIGSDTEIDVDFRVISASHQDLEALVQQGKFRQDLYFRIHVMDIVLPALRERGNDIILLAQHFIQKICQEWDIPVKPL
SERAREFLLAQYYPGNVRELRNMMERAITLSDESSIDLPHLQTAPLRPIAQTNYANATQQGTIGNDQLSHVPSRKLPEEG
LELYLEKIEKEILMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDGEDDSV

Nucleotide

• Length: 1365 bp

>NTDB_id=1060389 ACFN7Z_RS16320 WP_395442680.1 3319430..3320794(+) (pilR) [Acinetobacter sp. P1332]
ATGCAAATGTCTTTAAGTCGGATGGGGATTGATACACGTATTGCCTATCGCTTACAGGAGGCTGTTCAAGCACTTAAAAC
ACATCAATATGATGCCTGTCTGACAGATTTGAATTTACCTGATGGTAATGGATTAACGCTGGTGGATTTTATTGCTCAAA
ATTATCCTAATCTACCTGTAGCTGTATTAACTGCTTATGGCAACATGGATATTGCGATTGCAGCACTTAAAGCTGGTGCT
TTTGATTTTGTCAGTAAACCGATCAACCAAAAACATTTAGAGCAACTTTTACAAAAAGCCTTTAATCAGCCCATCAGTCA
TCTGCATATCCAAGAAGATACGCTTGAACATCGTCTGCTGATTGGTCAGTCCCTTCCTATTCAACAGCTACGTATCACCT
TAAAGAAAATTGCACGCTCGCAAGCCCCTGTCTTTATTACGGGTGAATCAGGCACTGGCAAAGAAGTGGTGGCTAATCTG
GTACATCGCCTGAGCAATCGCAATGAAGGGCCATTTATTGCCATTAACTGCGGTGCCATACCGACCGAACTGATGGAAAG
TGAATTGTTTGGACACCGTAAAGGCAGCTTCACAGGGGCCACTCAAGACAAACAAGGGCTGATTCTCTCTGCACATGGCG
GCAGTTTATTTTTAGATGAAATTGCCGAGTTACCGCTCACTATGCAGGTGAAACTGCTGCGCGCGGTACAAGAAAAACGC
ATTCGCCCAATTGGGAGTGACACGGAAATTGATGTCGATTTTCGTGTGATTAGTGCCAGCCATCAAGACCTAGAAGCACT
GGTACAACAAGGCAAGTTCCGTCAGGATTTGTACTTCCGCATCCATGTCATGGACATTGTGCTGCCTGCCCTACGTGAGC
GTGGCAATGACATTATTCTTTTAGCACAACATTTCATTCAGAAAATCTGCCAAGAATGGGACATCCCAGTCAAACCACTG
AGTGAACGTGCACGTGAGTTTTTATTGGCCCAATATTATCCAGGCAATGTGCGTGAACTACGCAATATGATGGAACGTGC
CATCACTTTAAGTGATGAAAGCAGTATCGACTTACCACACTTGCAAACAGCACCACTGCGACCGATTGCTCAGACCAACT
ATGCCAATGCCACCCAACAAGGTACTATTGGCAATGATCAACTTAGCCATGTGCCTTCGCGTAAATTGCCCGAAGAGGGT
TTAGAGCTGTATTTAGAAAAAATTGAAAAAGAAATTTTGATGAATGCGCTCAATCTCACCCACTGGAACCGAACACTAGC
GGCTAAAAAGCTCGGCATGTCTTTCCGTTCTTTACGTTATCGCTTGAAGAAATTCGGGCTAGATGGCGAAGACGATTCCG
TTTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (4-97)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Sigma-54 interaction domain (Sigma54_activat) (120-286)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.449	100	0.744
pilR	Pseudomonas aeruginosa PAK	49.446	99.339	0.491