Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACFN7Z_RS14555 Genome accession   NZ_CP171157
Coordinates   2938511..2938909 (-) Length   132 a.a.
NCBI ID   WP_029574943.1    Uniprot ID   A0AAJ6IBM2
Organism   Acinetobacter sp. P1332     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2933511..2943909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFN7Z_RS14525 (ACFN7Z_14525) - 2933583..2933852 (-) 270 WP_010325935.1 HPr family phosphocarrier protein -
  ACFN7Z_RS14530 (ACFN7Z_14530) rapZ 2933849..2934700 (-) 852 WP_395442122.1 RNase adapter RapZ -
  ACFN7Z_RS14535 (ACFN7Z_14535) panC 2934727..2935569 (-) 843 WP_010325934.1 pantoate--beta-alanine ligase -
  ACFN7Z_RS14540 (ACFN7Z_14540) panB 2935573..2936382 (-) 810 WP_010325933.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  ACFN7Z_RS14545 (ACFN7Z_14545) folK 2936419..2936907 (-) 489 WP_010325932.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  ACFN7Z_RS14550 (ACFN7Z_14550) pcnB 2936904..2938373 (-) 1470 WP_010325931.1 polynucleotide adenylyltransferase PcnB -
  ACFN7Z_RS14555 (ACFN7Z_14555) comEA 2938511..2938909 (-) 399 WP_029574943.1 ComEA family DNA-binding protein Machinery gene
  ACFN7Z_RS14560 (ACFN7Z_14560) mazG 2938928..2939689 (-) 762 WP_010325929.1 nucleoside triphosphate pyrophosphohydrolase -
  ACFN7Z_RS14565 (ACFN7Z_14565) - 2939808..2940575 (+) 768 WP_010325928.1 SDR family oxidoreductase -
  ACFN7Z_RS14570 (ACFN7Z_14570) - 2940615..2942921 (-) 2307 WP_004979149.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14697.19 Da        Isoelectric Point: 10.8498

>NTDB_id=1060379 ACFN7Z_RS14555 WP_029574943.1 2938511..2938909(-) (comEA) [Acinetobacter sp. P1332]
MIKIKVSLLIIALLLLSLLAWIPSSYAQSFDQNYLNWKAEQQVWDDRIQAPKSVKRAVSPVQAQPVSSTNKISLNQASVD
QLQQLQGVGLKKAQAIVAYRQKQGPFKTIDELQQVRGIGPAIFAKNKTRLGL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=1060379 ACFN7Z_RS14555 WP_029574943.1 2938511..2938909(-) (comEA) [Acinetobacter sp. P1332]
TTGATAAAAATAAAAGTAAGTTTGTTGATCATTGCGTTGTTATTACTGAGTTTACTGGCGTGGATACCCAGTAGTTATGC
ACAGTCTTTTGATCAGAACTATCTGAACTGGAAAGCAGAGCAGCAGGTGTGGGATGATCGTATTCAAGCTCCTAAAAGCG
TGAAACGTGCTGTGTCTCCTGTTCAGGCTCAACCTGTGTCGAGCACAAATAAAATTAGTTTAAATCAAGCCAGTGTTGAT
CAATTACAGCAACTTCAGGGTGTGGGTCTAAAAAAGGCACAGGCAATTGTGGCCTATCGCCAGAAACAAGGGCCATTTAA
GACCATAGATGAGCTACAACAGGTGCGCGGGATTGGACCGGCAATTTTTGCAAAAAATAAAACTCGTTTGGGCTTGTGA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(68-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

54.918

92.424

0.508
  comEA Acinetobacter baumannii D1279779

52.419

93.939

0.492

Multiple sequence alignment