Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACF3M1_RS03670 Genome accession   NZ_CP171131
Coordinates   832623..833027 (+) Length   134 a.a.
NCBI ID   WP_096208253.1    Uniprot ID   -
Organism   Luteimonas sp. WGS1318     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 827623..838027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF3M1_RS03650 (ACF3M1_03650) tsaB 829140..829844 (+) 705 WP_394004022.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  ACF3M1_RS03655 (ACF3M1_03655) lepB 829900..830544 (+) 645 WP_394004024.1 signal peptidase I -
  ACF3M1_RS03660 (ACF3M1_03660) - 830583..831455 (-) 873 WP_394004026.1 energy transducer TonB -
  ACF3M1_RS03665 (ACF3M1_03665) gshB 831476..832438 (-) 963 WP_394005169.1 glutathione synthase -
  ACF3M1_RS03670 (ACF3M1_03670) pilG 832623..833027 (+) 405 WP_096208253.1 twitching motility response regulator PilG Regulator
  ACF3M1_RS03675 (ACF3M1_03675) - 833039..833404 (+) 366 WP_394004029.1 response regulator -
  ACF3M1_RS03680 (ACF3M1_03680) - 833413..833964 (+) 552 WP_394005170.1 chemotaxis protein CheW -
  ACF3M1_RS03685 (ACF3M1_03685) - 834016..836037 (+) 2022 WP_394004031.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14899.13 Da        Isoelectric Point: 6.9840

>NTDB_id=1060274 ACF3M1_RS03670 WP_096208253.1 832623..833027(+) (pilG) [Luteimonas sp. WGS1318]
MTSDDKPSAGSLDGLRVMVIDDSKTIRRTAETLLKREGADVVTAVDGFEALAKIADQRPQIIFVDIMMPRLDGYQTCALI
KNNQVFRNTPVIMLSSKDGLFDKARGRIVGSEQYVTKPFTREELLDAIRTHVNA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=1060274 ACF3M1_RS03670 WP_096208253.1 832623..833027(+) (pilG) [Luteimonas sp. WGS1318]
ATGACCAGTGACGACAAGCCGTCAGCCGGCAGCCTCGATGGGCTGCGGGTGATGGTGATCGACGACTCGAAAACCATCCG
GCGCACCGCCGAGACGCTGCTCAAGCGTGAGGGTGCCGACGTGGTGACCGCAGTCGACGGGTTCGAGGCGCTGGCGAAGA
TCGCCGACCAGCGTCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGCTATCAGACCTGCGCGTTGATC
AAGAACAACCAGGTCTTCCGCAACACCCCGGTGATCATGCTCTCGTCCAAGGACGGCCTGTTCGACAAGGCCCGCGGACG
GATCGTGGGCTCGGAGCAGTACGTCACCAAGCCGTTCACGCGCGAGGAACTCCTCGACGCGATCCGCACGCACGTCAACG
CCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(17-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

92.537

0.679

Multiple sequence alignment