Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACF3N8_RS07855 | Genome accession | NZ_CP171119 |
| Coordinates | 1612705..1613676 (+) | Length | 323 a.a. |
| NCBI ID | WP_238100787.1 | Uniprot ID | - |
| Organism | Staphylococcus massiliensis strain WGS1515 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1607705..1618676
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF3N8_RS07820 (ACF3N8_07820) | rpmG | 1608202..1608351 (+) | 150 | WP_009382546.1 | 50S ribosomal protein L33 | - |
| ACF3N8_RS07825 (ACF3N8_07825) | - | 1608525..1609061 (+) | 537 | WP_009382545.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACF3N8_RS07830 (ACF3N8_07830) | - | 1609073..1610527 (+) | 1455 | WP_238102075.1 | rhomboid family intramembrane serine protease | - |
| ACF3N8_RS07835 (ACF3N8_07835) | - | 1610517..1610723 (+) | 207 | WP_009382542.1 | YqgQ family protein | - |
| ACF3N8_RS07840 (ACF3N8_07840) | - | 1610720..1611703 (+) | 984 | WP_009382541.1 | ROK family glucokinase | - |
| ACF3N8_RS07845 (ACF3N8_07845) | - | 1611706..1612026 (+) | 321 | WP_238102074.1 | MTH1187 family thiamine-binding protein | - |
| ACF3N8_RS07850 (ACF3N8_07850) | - | 1612026..1612649 (+) | 624 | WP_009382539.1 | MBL fold metallo-hydrolase | - |
| ACF3N8_RS07855 (ACF3N8_07855) | comGA | 1612705..1613676 (+) | 972 | WP_238100787.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACF3N8_RS07860 (ACF3N8_07860) | comGB | 1613648..1614721 (+) | 1074 | WP_017176497.1 | competence type IV pilus assembly protein ComGB | - |
| ACF3N8_RS07865 (ACF3N8_07865) | comGC | 1614738..1615073 (+) | 336 | WP_238100785.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACF3N8_RS07870 (ACF3N8_07870) | comGD | 1615048..1615491 (+) | 444 | WP_392449807.1 | competence type IV pilus minor pilin ComGD | - |
| ACF3N8_RS07875 (ACF3N8_07875) | comGE | 1615478..1615762 (+) | 285 | WP_009382533.1 | competence type IV pilus minor pilin ComGE | - |
| ACF3N8_RS07880 (ACF3N8_07880) | comGF | 1615740..1616171 (+) | 432 | WP_009382531.1 | competence type IV pilus minor pilin ComGF | - |
| ACF3N8_RS07885 (ACF3N8_07885) | - | 1616149..1616358 (+) | 210 | WP_009382530.1 | hypothetical protein | - |
| ACF3N8_RS07890 (ACF3N8_07890) | - | 1616345..1616863 (+) | 519 | WP_009382529.1 | shikimate kinase | - |
| ACF3N8_RS07895 (ACF3N8_07895) | gcvT | 1617020..1618111 (+) | 1092 | WP_009382528.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 323 a.a. Molecular weight: 37312.21 Da Isoelectric Point: 7.1332
>NTDB_id=1060236 ACF3N8_RS07855 WP_238100787.1 1612705..1613676(+) (comGA) [Staphylococcus massiliensis strain WGS1515]
MKLLFKGIIQQAILKQTSDVHFIPFRDEVVIKFRIGDELEEFERVKFDTYNKLLTYMKYEAGLDVSTKHKAQSGRYVFKQ
DIVYFLRISTLPLSLGIESCVIRITPQYFQDEKRYHSHQPLLKLMHKKQGLILFSGPTGAGKSTLMYQMVKYALNHLNRN
IITIEDPVEQLIEGITQISVNDKAEIDYETSFKAILRCDPDIILIGEIRDHHIAKKVIQASLSGHLVLSTIHANDCQGVL
LRLLEMGVTKEELKQAINQVTNQRLITTNDHERQLVYEVMDKEAIQYFLAHEVLPSSFLSIQDTLAKLNKEGIICEDTYN
RYH
MKLLFKGIIQQAILKQTSDVHFIPFRDEVVIKFRIGDELEEFERVKFDTYNKLLTYMKYEAGLDVSTKHKAQSGRYVFKQ
DIVYFLRISTLPLSLGIESCVIRITPQYFQDEKRYHSHQPLLKLMHKKQGLILFSGPTGAGKSTLMYQMVKYALNHLNRN
IITIEDPVEQLIEGITQISVNDKAEIDYETSFKAILRCDPDIILIGEIRDHHIAKKVIQASLSGHLVLSTIHANDCQGVL
LRLLEMGVTKEELKQAINQVTNQRLITTNDHERQLVYEVMDKEAIQYFLAHEVLPSSFLSIQDTLAKLNKEGIICEDTYN
RYH
Nucleotide
Download Length: 972 bp
>NTDB_id=1060236 ACF3N8_RS07855 WP_238100787.1 1612705..1613676(+) (comGA) [Staphylococcus massiliensis strain WGS1515]
TTGAAGTTATTATTTAAAGGTATTATTCAACAAGCCATTTTAAAGCAAACGTCTGATGTACACTTTATACCGTTTCGAGA
TGAGGTCGTCATTAAGTTTAGGATAGGAGATGAGTTAGAGGAGTTTGAACGCGTAAAGTTCGATACTTACAATAAGTTGT
TAACGTACATGAAATACGAAGCAGGTTTAGATGTATCGACAAAGCATAAAGCTCAAAGTGGGCGTTACGTCTTTAAGCAA
GATATCGTATATTTCCTAAGGATTTCTACATTGCCATTAAGTTTGGGGATTGAAAGTTGTGTCATTCGGATTACGCCTCA
ATACTTTCAAGATGAGAAGCGGTACCACTCACATCAGCCCTTATTAAAGCTCATGCATAAGAAGCAAGGTTTAATTTTAT
TTAGTGGACCAACAGGCGCTGGTAAAAGTACGCTGATGTATCAAATGGTGAAATATGCCTTAAATCATCTAAACCGCAAC
ATTATTACCATTGAGGATCCAGTCGAACAACTTATAGAAGGTATAACACAAATCTCGGTTAATGATAAGGCAGAAATCGA
TTATGAAACATCATTCAAAGCGATACTACGTTGTGATCCAGACATCATTTTAATCGGCGAAATCAGAGACCACCATATCG
CGAAGAAAGTGATTCAAGCGAGTTTAAGTGGTCACCTAGTGCTATCAACCATTCACGCGAATGATTGCCAAGGCGTTTTA
TTAAGGTTACTCGAAATGGGTGTTACGAAAGAAGAACTTAAACAAGCGATTAACCAAGTAACGAACCAGCGTTTAATAAC
TACCAATGATCATGAACGTCAACTGGTTTATGAAGTAATGGATAAGGAAGCCATTCAATATTTCTTAGCACATGAAGTCT
TGCCGTCCTCATTTTTGAGCATCCAAGACACGCTCGCTAAATTGAACAAAGAAGGTATTATTTGTGAAGACACGTATAAC
CGCTATCATTAA
TTGAAGTTATTATTTAAAGGTATTATTCAACAAGCCATTTTAAAGCAAACGTCTGATGTACACTTTATACCGTTTCGAGA
TGAGGTCGTCATTAAGTTTAGGATAGGAGATGAGTTAGAGGAGTTTGAACGCGTAAAGTTCGATACTTACAATAAGTTGT
TAACGTACATGAAATACGAAGCAGGTTTAGATGTATCGACAAAGCATAAAGCTCAAAGTGGGCGTTACGTCTTTAAGCAA
GATATCGTATATTTCCTAAGGATTTCTACATTGCCATTAAGTTTGGGGATTGAAAGTTGTGTCATTCGGATTACGCCTCA
ATACTTTCAAGATGAGAAGCGGTACCACTCACATCAGCCCTTATTAAAGCTCATGCATAAGAAGCAAGGTTTAATTTTAT
TTAGTGGACCAACAGGCGCTGGTAAAAGTACGCTGATGTATCAAATGGTGAAATATGCCTTAAATCATCTAAACCGCAAC
ATTATTACCATTGAGGATCCAGTCGAACAACTTATAGAAGGTATAACACAAATCTCGGTTAATGATAAGGCAGAAATCGA
TTATGAAACATCATTCAAAGCGATACTACGTTGTGATCCAGACATCATTTTAATCGGCGAAATCAGAGACCACCATATCG
CGAAGAAAGTGATTCAAGCGAGTTTAAGTGGTCACCTAGTGCTATCAACCATTCACGCGAATGATTGCCAAGGCGTTTTA
TTAAGGTTACTCGAAATGGGTGTTACGAAAGAAGAACTTAAACAAGCGATTAACCAAGTAACGAACCAGCGTTTAATAAC
TACCAATGATCATGAACGTCAACTGGTTTATGAAGTAATGGATAAGGAAGCCATTCAATATTTCTTAGCACATGAAGTCT
TGCCGTCCTCATTTTTGAGCATCCAAGACACGCTCGCTAAATTGAACAAAGAAGGTATTATTTGTGAAGACACGTATAAC
CGCTATCATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
61.3 |
100 |
0.613 |
| comGA | Staphylococcus aureus N315 |
61.3 |
100 |
0.613 |